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LOC653080 (glucuronidase beta pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 653080
Atlas_Id 68404
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69844669 and ends at 69997713 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC653080  653080  glucuronidase beta pseudogene
Aliases
GeneCards (Weizmann)LOC653080
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:69844669-69997713 [Contig_View]  LOC653080 [Vega]
TCGA cBioPortalLOC653080
AceView (NCBI)LOC653080
Genatlas (Paris)LOC653080
WikiGenes653080
SOURCE (Princeton)LOC653080
Genetics Home Reference (NIH)LOC653080
Genomic and cartography
GoldenPath hg38 (UCSC)LOC653080  -     chr5:69844669-69997713 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC653080  -     5q13.2   [Description]    (hg19-Feb_2009)
EnsemblLOC653080 - 5q13.2 [CytoView hg19]  LOC653080 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBILOC653080 [Mapview hg19]  LOC653080 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035963
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC653080
Cluster EST : UnigeneHs.582500 [ NCBI ]
CGAP (NCI)Hs.582500
Gene ExpressionLOC653080 [ NCBI-GEO ]   LOC653080 [ EBI - ARRAY_EXPRESS ]   LOC653080 [ SEEK ]   LOC653080 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC653080 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)653080
GTEX Portal (Tissue expression)LOC653080
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC653080
DMDM Disease mutations653080
Blocks (Seattle)LOC653080
Protein Interaction databases
BioGRIDLOC653080
STRING (EMBL)LOC653080
ZODIACLOC653080
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease653080
BioCentury BCIQLOC653080
ClinGenLOC653080
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653080
Clinical trialLOC653080
Miscellaneous
canSAR (ICR)LOC653080 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC653080
EVEXLOC653080
GoPubMedLOC653080
iHOPLOC653080
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:55 CET 2017

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