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LOC653786 (otoancorin pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 653786
Atlas_Id 68412
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 22545698 and ends at 22576865 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC653786  653786  otoancorin pseudogene
Aliases
GeneCards (Weizmann)LOC653786
Ensembl hg19 (Hinxton)ENSG00000257838 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257838 [Gene_View]  chr16:22545698-22576865 [Contig_View]  LOC653786 [Vega]
ICGC DataPortalENSG00000257838
TCGA cBioPortalLOC653786
AceView (NCBI)LOC653786
Genatlas (Paris)LOC653786
WikiGenes653786
SOURCE (Princeton)LOC653786
Genetics Home Reference (NIH)LOC653786
Genomic and cartography
GoldenPath hg38 (UCSC)LOC653786  -     chr16:22545698-22576865 +  16p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC653786  -     16p12.2   [Description]    (hg19-Feb_2009)
EnsemblLOC653786 - 16p12.2 [CytoView hg19]  LOC653786 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBILOC653786 [Mapview hg19]  LOC653786 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092323
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC653786
Cluster EST : UnigeneHs.564945 [ NCBI ]
CGAP (NCI)Hs.564945
Alternative Splicing GalleryENSG00000257838
Gene ExpressionLOC653786 [ NCBI-GEO ]   LOC653786 [ EBI - ARRAY_EXPRESS ]   LOC653786 [ SEEK ]   LOC653786 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC653786 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)653786
GTEX Portal (Tissue expression)LOC653786
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC653786
DMDM Disease mutations653786
Blocks (Seattle)LOC653786
Human Protein AtlasENSG00000257838
Protein Interaction databases
FunCoupENSG00000257838
BioGRIDLOC653786
STRING (EMBL)LOC653786
ZODIACLOC653786
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease653786
BioCentury BCIQLOC653786
ClinGenLOC653786
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653786
Clinical trialLOC653786
Miscellaneous
canSAR (ICR)LOC653786 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC653786
EVEXLOC653786
GoPubMedLOC653786
iHOPLOC653786
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:24:02 CEST 2017

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