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LOC654342 (lymphocyte-specific protein 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 654342
Atlas_Id 68414
Location 2p11.1  [Link to chromosome band 2p11]
Location_base_pair Starts at 91824709 and ends at 91847975 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC654342  654342  lymphocyte-specific protein 1 pseudogene
Aliases
GeneCards (Weizmann)LOC654342
Ensembl hg19 (Hinxton) [Gene_View]  chr2:91824709-91847975 [Contig_View]  LOC654342 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:91824709-91847975 [Contig_View]  LOC654342 [Vega]
TCGA cBioPortalLOC654342
AceView (NCBI)LOC654342
Genatlas (Paris)LOC654342
WikiGenes654342
SOURCE (Princeton)LOC654342
Genetics Home Reference (NIH)LOC654342
Genomic and cartography
GoldenPath hg19 (UCSC)LOC654342  -     chr2:91824709-91847975 -  2p11.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC654342  -     2p11.1   [Description]    (hg38-Dec_2013)
EnsemblLOC654342 - 2p11.1 [CytoView hg19]  LOC654342 - 2p11.1 [CytoView hg38]
Mapping of homologs : NCBILOC654342 [Mapview hg19]  LOC654342 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030764 BF031534 BM826054
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_034508 NW_004929302
Consensus coding sequences : CCDS (NCBI)LOC654342
Cluster EST : UnigeneHs.469287 [ NCBI ]
CGAP (NCI)Hs.469287
Gene ExpressionLOC654342 [ NCBI-GEO ]   LOC654342 [ EBI - ARRAY_EXPRESS ]   LOC654342 [ SEEK ]   LOC654342 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC654342 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)654342
GTEX Portal (Tissue expression)LOC654342
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC654342
DMDM Disease mutations654342
Blocks (Seattle)LOC654342
Protein Interaction databases
BioGRIDLOC654342
STRING (EMBL)LOC654342
ZODIACLOC654342
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease654342
BioCentury BCIQLOC654342
ClinGenLOC654342
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD654342
Clinical trialLOC654342
Miscellaneous
canSAR (ICR)LOC654342 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC654342
EVEXLOC654342
GoPubMedLOC654342
iHOPLOC654342
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:26:22 CET 2017

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