Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC728040 (hCG1813624)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 728040
Atlas_Id 68430
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 73508803 and ends at 73528533 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC728040  728040  hCG1813624
Aliases
GeneCards (Weizmann)LOC728040
Ensembl hg19 (Hinxton)ENSG00000250436 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250436 [Gene_View]  chr4:73508803-73528533 [Contig_View]  LOC728040 [Vega]
ICGC DataPortalENSG00000250436
TCGA cBioPortalLOC728040
AceView (NCBI)LOC728040
Genatlas (Paris)LOC728040
WikiGenes728040
SOURCE (Princeton)LOC728040
Genetics Home Reference (NIH)LOC728040
Genomic and cartography
GoldenPath hg38 (UCSC)LOC728040  -     chr4:73508803-73528533 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC728040  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblLOC728040 - 4q13.3 [CytoView hg19]  LOC728040 - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBILOC728040 [Mapview hg19]  LOC728040 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR745071
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC728040
Cluster EST : UnigeneHs.640574 [ NCBI ]
CGAP (NCI)Hs.640574
Alternative Splicing GalleryENSG00000250436
Gene ExpressionLOC728040 [ NCBI-GEO ]   LOC728040 [ EBI - ARRAY_EXPRESS ]   LOC728040 [ SEEK ]   LOC728040 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC728040 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728040
GTEX Portal (Tissue expression)LOC728040
Human Protein AtlasENSG00000250436-LOC728040 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC728040
DMDM Disease mutations728040
Blocks (Seattle)LOC728040
Human Protein Atlas [tissue]ENSG00000250436-LOC728040 [tissue]
Protein Interaction databases
FunCoupENSG00000250436
BioGRIDLOC728040
STRING (EMBL)LOC728040
ZODIACLOC728040
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease728040
BioCentury BCIQLOC728040
ClinGenLOC728040
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728040
Clinical trialLOC728040
Miscellaneous
canSAR (ICR)LOC728040 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC728040
EVEXLOC728040
GoPubMedLOC728040
iHOPLOC728040
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:57:56 CET 2017

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