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LOC728145 (collagen alpha-1(I) chain)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 728145
Atlas_Id 68438
Location 5q35.1  [Link to chromosome band 5q35]
Location_base_pair Starts at 171305981 and ends at 171308755 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC728145  728145  collagen alpha-1(I) chain
Aliases
GeneCards (Weizmann)LOC728145
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:171305981-171308755 [Contig_View]  LOC728145 [Vega]
TCGA cBioPortalLOC728145
AceView (NCBI)LOC728145
Genatlas (Paris)LOC728145
WikiGenes728145
SOURCE (Princeton)LOC728145
Genetics Home Reference (NIH)LOC728145
Genomic and cartography
GoldenPath hg38 (UCSC)LOC728145  -     chr5:171305981-171308755 -  5q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC728145  -     5q35.1   [Description]    (hg19-Feb_2009)
EnsemblLOC728145 - 5q35.1 [CytoView hg19]  LOC728145 - 5q35.1 [CytoView hg38]
Mapping of homologs : NCBILOC728145 [Mapview hg19]  LOC728145 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090994
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC728145
Cluster EST : UnigeneHs.638538 [ NCBI ]
CGAP (NCI)Hs.638538
Gene ExpressionLOC728145 [ NCBI-GEO ]   LOC728145 [ EBI - ARRAY_EXPRESS ]   LOC728145 [ SEEK ]   LOC728145 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC728145 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728145
GTEX Portal (Tissue expression)LOC728145
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC728145
DMDM Disease mutations728145
Blocks (Seattle)LOC728145
IPIIPI00977417   
Protein Interaction databases
BioGRIDLOC728145
STRING (EMBL)LOC728145
ZODIACLOC728145
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease728145
BioCentury BCIQLOC728145
ClinGenLOC728145
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728145
Clinical trialLOC728145
Miscellaneous
canSAR (ICR)LOC728145 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC728145
EVEXLOC728145
GoPubMedLOC728145
iHOPLOC728145
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:28:33 CEST 2017

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