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LOC728989 (phosphodiesterase 4D interacting protein pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 728989
Atlas_Id 68470
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 147019336 and ends at 147043039 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC728989  728989  phosphodiesterase 4D interacting protein pseudogene
Aliases
GeneCards (Weizmann)LOC728989
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:147019336-147043039 [Contig_View]  LOC728989 [Vega]
TCGA cBioPortalLOC728989
AceView (NCBI)LOC728989
Genatlas (Paris)LOC728989
WikiGenes728989
SOURCE (Princeton)LOC728989
Genetics Home Reference (NIH)LOC728989
Genomic and cartography
GoldenPath hg38 (UCSC)LOC728989  -     chr1:147019336-147043039 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC728989  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblLOC728989 - 1q21.1 [CytoView hg19]  LOC728989 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBILOC728989 [Mapview hg19]  LOC728989 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK299984
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC728989
Cluster EST : UnigeneHs.537068 [ NCBI ]
CGAP (NCI)Hs.537068
Gene ExpressionLOC728989 [ NCBI-GEO ]   LOC728989 [ EBI - ARRAY_EXPRESS ]   LOC728989 [ SEEK ]   LOC728989 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC728989 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728989
GTEX Portal (Tissue expression)LOC728989
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC728989
DMDM Disease mutations728989
Blocks (Seattle)LOC728989
Protein Interaction databases
BioGRIDLOC728989
STRING (EMBL)LOC728989
ZODIACLOC728989
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease728989
BioCentury BCIQLOC728989
ClinGenLOC728989
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728989
Clinical trialLOC728989
Miscellaneous
canSAR (ICR)LOC728989 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC728989
EVEXLOC728989
GoPubMedLOC728989
iHOPLOC728989
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:58:05 CET 2017

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