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LOC729603 (calcineurin like EF-hand protein 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 729603
Atlas_Id 68492
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 160093082 and ends at 160096212 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC729603  729603  calcineurin like EF-hand protein 1 pseudogene
Aliases
GeneCards (Weizmann)LOC729603
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:160093082-160096212 [Contig_View]  LOC729603 [Vega]
TCGA cBioPortalLOC729603
AceView (NCBI)LOC729603
Genatlas (Paris)LOC729603
WikiGenes729603
SOURCE (Princeton)LOC729603
Genetics Home Reference (NIH)LOC729603
Genomic and cartography
GoldenPath hg38 (UCSC)LOC729603  -     chr6:160093082-160096212 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC729603  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblLOC729603 - 6q25.3 [CytoView hg19]  LOC729603 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBILOC729603 [Mapview hg19]  LOC729603 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096733 AK097332 BC032536
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC729603
Cluster EST : UnigeneHs.674810 [ NCBI ]
CGAP (NCI)Hs.674810
Gene ExpressionLOC729603 [ NCBI-GEO ]   LOC729603 [ EBI - ARRAY_EXPRESS ]   LOC729603 [ SEEK ]   LOC729603 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC729603 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729603
GTEX Portal (Tissue expression)LOC729603
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC729603
DMDM Disease mutations729603
Blocks (Seattle)LOC729603
Protein Interaction databases
BioGRIDLOC729603
STRING (EMBL)LOC729603
ZODIACLOC729603
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease729603
BioCentury BCIQLOC729603
ClinGenLOC729603
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729603
Clinical trialLOC729603
Miscellaneous
canSAR (ICR)LOC729603 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC729603
EVEXLOC729603
GoPubMedLOC729603
iHOPLOC729603
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:11:16 CEST 2018

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