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LOC729652 (spidroin-2)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 729652
Atlas_Id 68494
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2514951 and ends at 2518214 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC729652  729652  spidroin-2
Aliases
GeneCards (Weizmann)LOC729652
Ensembl hg19 (Hinxton)ENSG00000259895 [Gene_View]  chr16:2514951-2518214 [Contig_View]  LOC729652 [Vega]
Ensembl hg38 (Hinxton)ENSG00000259895 [Gene_View]  chr16:2514951-2518214 [Contig_View]  LOC729652 [Vega]
ICGC DataPortalENSG00000259895
TCGA cBioPortalLOC729652
AceView (NCBI)LOC729652
Genatlas (Paris)LOC729652
WikiGenes729652
SOURCE (Princeton)LOC729652
Genetics Home Reference (NIH)LOC729652
Genomic and cartography
GoldenPath hg19 (UCSC)LOC729652  -     chr16:2514951-2518214 -  16p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC729652  -     16p13.3   [Description]    (hg38-Dec_2013)
EnsemblLOC729652 - 16p13.3 [CytoView hg19]  LOC729652 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILOC729652 [Mapview hg19]  LOC729652 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL834536 HG507622
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)LOC729652
Cluster EST : UnigeneHs.638553 [ NCBI ]
CGAP (NCI)Hs.638553
Alternative Splicing GalleryENSG00000259895
Gene ExpressionLOC729652 [ NCBI-GEO ]   LOC729652 [ EBI - ARRAY_EXPRESS ]   LOC729652 [ SEEK ]   LOC729652 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC729652 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729652
GTEX Portal (Tissue expression)LOC729652
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC729652
DMDM Disease mutations729652
Blocks (Seattle)LOC729652
Human Protein AtlasENSG00000259895
IPIIPI00168483   
Protein Interaction databases
FunCoupENSG00000259895
BioGRIDLOC729652
STRING (EMBL)LOC729652
ZODIACLOC729652
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease729652
BioCentury BCIQLOC729652
ClinGenLOC729652
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729652
Clinical trialLOC729652
Miscellaneous
canSAR (ICR)LOC729652 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC729652
EVEXLOC729652
GoPubMedLOC729652
iHOPLOC729652
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:26:40 CET 2017

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