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LOC730668 (dynein heavy chain -like pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 730668
Atlas_Id 68529
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 46006616 and ends at 46010777 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC730668  730668  dynein heavy chain -like pseudogene
Aliases
GeneCards (Weizmann)LOC730668
Ensembl hg19 (Hinxton)ENSG00000280424 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280424 [Gene_View]  chr22:46006616-46010777 [Contig_View]  LOC730668 [Vega]
ICGC DataPortalENSG00000280424
TCGA cBioPortalLOC730668
AceView (NCBI)LOC730668
Genatlas (Paris)LOC730668
WikiGenes730668
SOURCE (Princeton)LOC730668
Genetics Home Reference (NIH)LOC730668
Genomic and cartography
GoldenPath hg38 (UCSC)LOC730668  -     chr22:46006616-46010777 +  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC730668  -     22q13.31   [Description]    (hg19-Feb_2009)
EnsemblLOC730668 - 22q13.31 [CytoView hg19]  LOC730668 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBILOC730668 [Mapview hg19]  LOC730668 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128491
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC730668
Cluster EST : UnigeneHs.640071 [ NCBI ]
CGAP (NCI)Hs.640071
Alternative Splicing GalleryENSG00000280424
Gene ExpressionLOC730668 [ NCBI-GEO ]   LOC730668 [ EBI - ARRAY_EXPRESS ]   LOC730668 [ SEEK ]   LOC730668 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC730668 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)730668
GTEX Portal (Tissue expression)LOC730668
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZR54   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZR54  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZR54
Splice isoforms : SwissVarQ6ZR54
PhosPhoSitePlusQ6ZR54
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC730668
DMDM Disease mutations730668
Blocks (Seattle)LOC730668
SuperfamilyQ6ZR54
Human Protein AtlasENSG00000280424
Peptide AtlasQ6ZR54
Protein Interaction databases
DIP (DOE-UCLA)Q6ZR54
IntAct (EBI)Q6ZR54
FunCoupENSG00000280424
BioGRIDLOC730668
STRING (EMBL)LOC730668
ZODIACLOC730668
Ontologies - Pathways
QuickGOQ6ZR54
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC730668
Atlas of Cancer Signalling NetworkLOC730668
Wikipedia pathwaysLOC730668
Orthology - Evolution
OrthoDB730668
GeneTree (enSembl)ENSG00000280424
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZR54
HOGENOMQ6ZR54
Homologs : HomoloGeneLOC730668
Homology/Alignments : Family Browser (UCSC)LOC730668
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC730668 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC730668
dbVarLOC730668
ClinVarLOC730668
1000_GenomesLOC730668 
Exome Variant ServerLOC730668
ExAC (Exome Aggregation Consortium)LOC730668 (select the gene name)
Genetic variants : HAPMAP730668
Genomic Variants (DGV)LOC730668 [DGVbeta]
DECIPHERLOC730668 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC730668 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC730668
DgiDB (Drug Gene Interaction Database)LOC730668
DoCM (Curated mutations)LOC730668 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC730668 (select a term)
intoGenLOC730668
Cancer3DLOC730668(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC730668
Genetic Testing Registry LOC730668
NextProtQ6ZR54 [Medical]
TSGene730668
GENETestsLOC730668
Target ValidationLOC730668
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease730668
BioCentury BCIQLOC730668
ClinGenLOC730668
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730668
Clinical trialLOC730668
Miscellaneous
canSAR (ICR)LOC730668 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC730668
EVEXLOC730668
GoPubMedLOC730668
iHOPLOC730668
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:24:32 CEST 2017

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