Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC79999 (uncharacterized protein ENSP00000382033)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 79999
Atlas_Id 68536
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 19089461 and ends at 19097563 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC79999  79999  uncharacterized protein ENSP00000382033
Aliases
GeneCards (Weizmann)LOC79999
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:19089461-19097563 [Contig_View]  LOC79999 [Vega]
TCGA cBioPortalLOC79999
AceView (NCBI)LOC79999
Genatlas (Paris)LOC79999
WikiGenes79999
SOURCE (Princeton)LOC79999
Genetics Home Reference (NIH)LOC79999
Genomic and cartography
GoldenPath hg38 (UCSC)LOC79999  -     chr17:19089461-19097563 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC79999  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC79999 - 17p11.2 [CytoView hg19]  LOC79999 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBILOC79999 [Mapview hg19]  LOC79999 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026312 BU595835
RefSeq transcript (Entrez)NM_001291904 NM_024934
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC79999
Cluster EST : UnigeneHs.677375 [ NCBI ]
CGAP (NCI)Hs.677375
Gene ExpressionLOC79999 [ NCBI-GEO ]   LOC79999 [ EBI - ARRAY_EXPRESS ]   LOC79999 [ SEEK ]   LOC79999 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC79999 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)79999
GTEX Portal (Tissue expression)LOC79999
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC79999
DMDM Disease mutations79999
Blocks (Seattle)LOC79999
IPIIPI00797070   IPI00794921   IPI00788989   IPI00789820   
Protein Interaction databases
BioGRIDLOC79999
STRING (EMBL)LOC79999
ZODIACLOC79999
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease79999
BioCentury BCIQLOC79999
ClinGenLOC79999
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79999
Clinical trialLOC79999
Miscellaneous
canSAR (ICR)LOC79999 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC79999
EVEXLOC79999
GoPubMedLOC79999
iHOPLOC79999
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:58:18 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.