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LOC84214 (uncharacterized LOC84214)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 84214
Atlas_Id 68538
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 65840205 and ends at 65840601 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC84214  84214  uncharacterized LOC84214
Aliases
GeneCards (Weizmann)LOC84214
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:65840205-65840601 [Contig_View]  LOC84214 [Vega]
TCGA cBioPortalLOC84214
AceView (NCBI)LOC84214
Genatlas (Paris)LOC84214
WikiGenes84214
SOURCE (Princeton)LOC84214
Genetics Home Reference (NIH)LOC84214
Genomic and cartography
GoldenPath hg38 (UCSC)LOC84214  -     chr7:65840205-65840601 +  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC84214  -     7q11.21   [Description]    (hg19-Feb_2009)
EnsemblLOC84214 - 7q11.21 [CytoView hg19]  LOC84214 - 7q11.21 [CytoView hg38]
Mapping of homologs : NCBILOC84214 [Mapview hg19]  LOC84214 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK311984 AL136837
RefSeq transcript (Entrez)NM_032254
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC84214
Cluster EST : UnigeneHs.736535 [ NCBI ]
CGAP (NCI)Hs.736535
Gene ExpressionLOC84214 [ NCBI-GEO ]   LOC84214 [ EBI - ARRAY_EXPRESS ]   LOC84214 [ SEEK ]   LOC84214 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC84214 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84214
GTEX Portal (Tissue expression)LOC84214
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ75L30   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ75L30  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ75L30
Splice isoforms : SwissVarQ75L30
PhosPhoSitePlusQ75L30
Domains : Interpro (EBI)DUF4705   
Domain families : Pfam (Sanger)DUF4705 (PF15788)   
Domain families : Pfam (NCBI)pfam15788   
Conserved Domain (NCBI)LOC84214
DMDM Disease mutations84214
Blocks (Seattle)LOC84214
SuperfamilyQ75L30
Peptide AtlasQ75L30
IPIIPI00031039   
Protein Interaction databases
DIP (DOE-UCLA)Q75L30
IntAct (EBI)Q75L30
BioGRIDLOC84214
STRING (EMBL)LOC84214
ZODIACLOC84214
Ontologies - Pathways
QuickGOQ75L30
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC84214
Atlas of Cancer Signalling NetworkLOC84214
Wikipedia pathwaysLOC84214
Orthology - Evolution
OrthoDB84214
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ75L30
HOGENOMQ75L30
Homologs : HomoloGeneLOC84214
Homology/Alignments : Family Browser (UCSC)LOC84214
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC84214 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC84214
dbVarLOC84214
ClinVarLOC84214
1000_GenomesLOC84214 
Exome Variant ServerLOC84214
ExAC (Exome Aggregation Consortium)LOC84214 (select the gene name)
Genetic variants : HAPMAP84214
Genomic Variants (DGV)LOC84214 [DGVbeta]
DECIPHERLOC84214 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC84214 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC84214
DgiDB (Drug Gene Interaction Database)LOC84214
DoCM (Curated mutations)LOC84214 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC84214 (select a term)
intoGenLOC84214
Cancer3DLOC84214(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC84214
Genetic Testing Registry LOC84214
NextProtQ75L30 [Medical]
TSGene84214
GENETestsLOC84214
Target ValidationLOC84214
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease84214
BioCentury BCIQLOC84214
ClinGenLOC84214
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84214
Clinical trialLOC84214
Miscellaneous
canSAR (ICR)LOC84214 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC84214
EVEXLOC84214
GoPubMedLOC84214
iHOPLOC84214
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:24:34 CEST 2017

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