LOXL2 (lysyl oxidase-like 2)

Identity

Other names	LOR2
	WS9-14
HGNC	LOXL2
Location	8p21.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LOXL2   6666
Entrez_Gene	LOXL2  4017  lysyl oxidase-like 2
	Cards
GeneCards	LOXL2
Ensembl	LOXL2 [Search_View]   ENSG00000134013 [Gene_View]
Genatlas	LOXL2
GeneLynx	LOXL2
eGenome	LOXL2
euGene	4017
	Genomic and cartography
GoldenPath	LOXL2  -  8p21.3   chr8:23210355-23317667 -  8p21.3   [Description]    (hg18-March_2006)
Ensembl	LOXL2 - 8p21.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LOXL2
	Gene and transcription
Genbank	AF117949 [ ENTREZ ]
Genbank	AK098436 [ ENTREZ ]
Genbank	AK124508 [ ENTREZ ]
Genbank	AK222477 [ ENTREZ ]
Genbank	AK312266 [ ENTREZ ]
RefSeq	NM_002318 [ SRS ]    NM_002318 [ ENTREZ ]
RefSeq	AC_000051 [ SRS ]    AC_000051 [ ENTREZ ]
RefSeq	AC_000140 [ SRS ]    AC_000140 [ ENTREZ ]
RefSeq	NC_000008 [ SRS ]    NC_000008 [ ENTREZ ]
RefSeq	NT_023666 [ SRS ]    NT_023666 [ ENTREZ ]
RefSeq	NW_001839127 [ SRS ]    NW_001839127 [ ENTREZ ]
RefSeq	NW_923907 [ SRS ]    NW_923907 [ ENTREZ ]
AceView	LOXL2 AceView - NCBI
Unigene	Hs.661130 [ SRS ]    Hs.661130 [ NCBI ]     HS661130 [ spliceNest ]
Fast-db	2654 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q53HV3 [ SRS]    Q53HV3 [ EXPASY ]     Q53HV3 [ INTERPRO ]     Q53HV3 [ UNIPROT ]
Prosite	PS00926 LYSYL_OXIDASE [ SRS ]    PS00926 LYSYL_OXIDASE [ Expasy ]
Prosite	PS00420 SRCR_1 [ SRS ]    PS00420 SRCR_1 [ Expasy ]
Prosite	PS50287 SRCR_2 [ SRS ]    PS50287 SRCR_2 [ Expasy ]
Interpro	IPR001695 Lysyl_oxidase [ SRS ]    IPR001695 Lysyl_oxidase [ EBI ]
Interpro	IPR001190 Srcr_rcpt [ SRS ]    IPR001190 Srcr_rcpt [ EBI ]
Interpro	IPR017448 Srcr_rcpt-rel [ SRS ]    IPR017448 Srcr_rcpt-rel [ EBI ]
CluSTr	Q53HV3
Pfam	PF01186 Lysyl_oxidase [ SRS ]    PF01186 Lysyl_oxidase [ Sanger ]    pfam01186 [ NCBI-CDD ]
Pfam	PF00530 SRCR [ SRS ]    PF00530 SRCR [ Sanger ]    pfam00530 [ NCBI-CDD ]
Smart	SM00202 SR [EMBL]
Prodom	PD013887 Lysyl_oxidase[INRA-Toulouse]
Prodom	Q53HV3 Q53HV3_HUMAN [ Domain structure ]   Q53HV3 Q53HV3_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q53HV3
HPRD	09446
	Protein Interaction databases
DIP	Q53HV3
IntAct	Q53HV3
	Polymorphism : SNP, mutations, diseases
OMIM	606663    [ map ]
GENECLINICS	606663
SNP	LOXL2 [dbSNP-NCBI]
SNP	NM_002318 [SNP-NCI]
SNP	LOXL2 [GeneSNPs - Utah]  LOXL2] [HGBASE - SRS]
HAPMAP	LOXL2 [HAPMAP]
COSMIC	LOXL2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	LOXL2
	General knowledge
Family Browser	LOXL2 [UCSC Family Browser]
SOURCE	NM_002318
SMD	Hs.661130
SAGE	Hs.661130
GO	protein-lysine 6-oxidase activity [Amigo]  protein-lysine 6-oxidase activity
GO	scavenger receptor activity [Amigo]  scavenger receptor activity
GO	copper ion binding [Amigo]  copper ion binding
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	protein modification process [Amigo]  protein modification process
GO	cell adhesion [Amigo]  cell adhesion
GO	aging [Amigo]  aging
GO	electron carrier activity [Amigo]  electron carrier activity
GO	membrane [Amigo]  membrane
GO	oxidoreductase activity [Amigo]  oxidoreductase activity
GO	metal ion binding [Amigo]  metal ion binding
GO	oxidation reduction [Amigo]  oxidation reduction
KEGG	Arginine and proline metabolism
PubGene	LOXL2
TreeFam	LOXL2
CTD	4017 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LOXL2 Related clones (RZPD - Berlin)
	PubMed
PubMed	17 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:18:21 2008