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LPAR6 (lysophosphatidic acid receptor 6)

Identity

Alias (NCBI)ARWH1
HYPT8
LAH3
LPA-6
P2RY5
P2Y5
HGNC (Hugo) LPAR6
HGNC Alias symbP2Y5
HGNC Previous nameP2RY5
HGNC Previous namepurinergic receptor P2Y, G-protein coupled, 5
LocusID (NCBI) 10161
Atlas_Id 41626
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 48411046 and ends at 48444669 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EBPL (13q14.2) / LPAR6 (13q14.2)LPAR6 (13q14.2) / ITM2B (13q14.2)EBPL 13q14.2 / LPAR6 13q14.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(13;13)(q14;q14) LPAR6/ITM2B


External links

Nomenclature
HGNC (Hugo)LPAR6   15520
Cards
Entrez_Gene (NCBI)LPAR6    lysophosphatidic acid receptor 6
AliasesARWH1; HYPT8; LAH3; LPA-6; 
P2RY5; P2Y5
GeneCards (Weizmann)LPAR6
Ensembl hg19 (Hinxton)ENSG00000139679 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139679 [Gene_View]  ENSG00000139679 [Sequence]  chr13:48411046-48444669 [Contig_View]  LPAR6 [Vega]
ICGC DataPortalENSG00000139679
TCGA cBioPortalLPAR6
AceView (NCBI)LPAR6
Genatlas (Paris)LPAR6
SOURCE (Princeton)LPAR6
Genetics Home Reference (NIH)LPAR6
Genomic and cartography
GoldenPath hg38 (UCSC)LPAR6  -     chr13:48411046-48444669 -  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LPAR6  -     13q14.2   [Description]    (hg19-Feb_2009)
GoldenPathLPAR6 - 13q14.2 [CytoView hg19]  LPAR6 - 13q14.2 [CytoView hg38]
ImmunoBaseENSG00000139679
genome Data Viewer NCBILPAR6 [Mapview hg19]  
OMIM278150   609239   
Gene and transcription
Genbank (Entrez)AF000546 AK122856 AK123059 AK223389 BC039373
RefSeq transcript (Entrez)NM_001162497 NM_001162498 NM_001377316 NM_001377317 NM_005767
Consensus coding sequences : CCDS (NCBI)LPAR6
Alternative Splicing GalleryENSG00000139679
Gene ExpressionLPAR6 [ NCBI-GEO ]   LPAR6 [ EBI - ARRAY_EXPRESS ]   LPAR6 [ SEEK ]   LPAR6 [ MEM ]
Gene Expression Viewer (FireBrowse)LPAR6 [ Firebrowse - Broad ]
GenevisibleExpression of LPAR6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10161
GTEX Portal (Tissue expression)LPAR6
Human Protein AtlasENSG00000139679-LPAR6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LPAR6
Human Protein Atlas [tissue]ENSG00000139679-LPAR6 [tissue]
HPRD16465
Protein Interaction databases
BioGRIDLPAR6
STRING (EMBL)LPAR6
ZODIACLPAR6
Ontologies - Pathways
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLPAR6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Sep 15 22:21:57 CEST 2021

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