LRDD (leucine-rich repeats and death domain containing)

Identity

Other names	DKFZp434D229
	MGC16925
	PIDD
HGNC	LRDD
Location	11p15.5
Location_base_pair	Starts at 789179 and ends at 795245 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LRDD   16491
Entrez_Gene	LRDD  55367  leucine-rich repeats and death domain containing
	Cards
GeneCards	LRDD
Ensembl	LRDD [Search_View]   ENSG00000177595 [Gene_View]
Genatlas	LRDD
GeneLynx	LRDD
eGenome	LRDD
euGene	55367
	Genomic and cartography
GoldenPath	LRDD  -  11p15.5   chr11:789179-795245 -  11p15.5   [Description]    (hg18-March_2006)
Ensembl	LRDD - 11p15.5 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LRDD
	Gene and transcription
Genbank	AB208832 [ ENTREZ ]
Genbank	AB208949 [ ENTREZ ]
Genbank	AB209529 [ ENTREZ ]
Genbank	AF229178 [ ENTREZ ]
Genbank	AF274972 [ ENTREZ ]
RefSeq	NM_018494 [ SRS ]    NM_018494 [ ENTREZ ]
RefSeq	NM_145886 [ SRS ]    NM_145886 [ ENTREZ ]
RefSeq	NM_145887 [ SRS ]    NM_145887 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	AC_000143 [ SRS ]    AC_000143 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_035113 [ SRS ]    NT_035113 [ ENTREZ ]
RefSeq	NW_001838016 [ SRS ]    NW_001838016 [ ENTREZ ]
RefSeq	NW_924962 [ SRS ]    NW_924962 [ ENTREZ ]
AceView	LRDD AceView - NCBI
Unigene	Hs.592290 [ SRS ]    Hs.592290 [ NCBI ]     HS592290 [ spliceNest ]
Fast-db	413 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9HB75 [ SRS]    Q9HB75 [ EXPASY ]     Q9HB75 [ INTERPRO ]     Q9HB75 [ UNIPROT ]
Prosite	PS50017 DEATH_DOMAIN [ SRS ]    PS50017 DEATH_DOMAIN [ Expasy ]
Prosite	PS51145 ZU5 [ SRS ]    PS51145 ZU5 [ Expasy ]
Interpro	IPR000488 Death [ SRS ]    IPR000488 Death [ EBI ]
Interpro	IPR011029 DEATH_like [ SRS ]    IPR011029 DEATH_like [ EBI ]
Interpro	IPR001611 LRR [ SRS ]    IPR001611 LRR [ EBI ]
Interpro	IPR003591 LRR_sub-typ [ SRS ]    IPR003591 LRR_sub-typ [ EBI ]
Interpro	IPR000906 ZU5 [ SRS ]    IPR000906 ZU5 [ EBI ]
CluSTr	Q9HB75
Pfam	PF00531 Death [ SRS ]    PF00531 Death [ Sanger ]    pfam00531 [ NCBI-CDD ]
Pfam	PF00560 LRR_1 [ SRS ]    PF00560 LRR_1 [ Sanger ]    pfam00560 [ NCBI-CDD ]
Smart	SM00005 DEATH [EMBL]
Smart	SM00369 LRR_TYP [EMBL]
Blocks	Q9HB75
PDB	2OF5 [ SRS ]    2OF5 [ PdbSum ],   2OF5 [ IMB ]   2OF5 [ RSDB ]
HPRD	11284
	Protein Interaction databases
DIP	Q9HB75
IntAct	Q9HB75
	Polymorphism : SNP, mutations, diseases
OMIM	605247    [ map ]
GENECLINICS	605247
SNP	LRDD [dbSNP-NCBI]
SNP	NM_018494 [SNP-NCI]
SNP	NM_145886 [SNP-NCI]
SNP	NM_145887 [SNP-NCI]
SNP	LRDD [GeneSNPs - Utah]  LRDD] [HGBASE - SRS]
HAPMAP	LRDD [HAPMAP]
COSMIC	LRDD [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	LRDD
	General knowledge
Family Browser	LRDD [UCSC Family Browser]
SOURCE	NM_018494
SOURCE	NM_145886
SOURCE	NM_145887
SMD	Hs.592290
SAGE	Hs.592290
GO	death receptor binding [Amigo]  death receptor binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	apoptosis [Amigo]  apoptosis
GO	signal transduction [Amigo]  signal transduction
PubGene	LRDD
TreeFam	LRDD
CTD	55367 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LRDD Related clones (RZPD - Berlin)
	PubMed
PubMed	16 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:48:52 2008