Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LRRC16A (-)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 55604
Atlas_Id 68595
Location -  [Link to chromosome band ]
Fusion genes
(updated 2016)
CMAHP (6p22.3) / LRRC16A (6p22.2)GUSBP2 (6p22.2) / LRRC16A (6p22.2)LRRC16A (6p22.2) / CTSW (11q13.1)
LRRC16A (6p22.2) / MRS2 (6p22.3)LRRC16A (6p22.2) / PNRC2 (1p36.11)LRRC16A (6p22.2) / SLC17A1 (6p22.2)
PNRC2 (1p36.11) / LRRC16A (6p22.2)LRRC16A CTSWLRRC16A MRS2
LRRC16A SLC17A1
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LRRC16A  55604  -
Aliases
GeneCards (Weizmann)LRRC16A
Ensembl hg19 (Hinxton)ENSG00000079691 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000079691 [Gene_View]  - [Contig_View]  LRRC16A [Vega]
ICGC DataPortalENSG00000079691
TCGA cBioPortalLRRC16A
AceView (NCBI)LRRC16A
Genatlas (Paris)LRRC16A
WikiGenes55604
SOURCE (Princeton)LRRC16A
Genetics Home Reference (NIH)LRRC16A
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC16A  -  
GoldenPath hg19 (UCSC)LRRC16A  -  
EnsemblLRRC16A - [CytoView hg19]  LRRC16A - [CytoView hg38]
Mapping of homologs : NCBILRRC16A [Mapview hg19]  LRRC16A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRRC16A
Alternative Splicing GalleryENSG00000079691
Gene ExpressionLRRC16A [ NCBI-GEO ]   LRRC16A [ EBI - ARRAY_EXPRESS ]   LRRC16A [ SEEK ]   LRRC16A [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC16A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55604
GTEX Portal (Tissue expression)LRRC16A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC16A
DMDM Disease mutations55604
Blocks (Seattle)LRRC16A
Human Protein AtlasENSG00000079691
HPRD11285
Protein Interaction databases
FunCoupENSG00000079691
BioGRIDLRRC16A
STRING (EMBL)LRRC16A
ZODIACLRRC16A
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease55604
BioCentury BCIQLRRC16A
ClinGenLRRC16A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55604
Clinical trialLRRC16A
Miscellaneous
canSAR (ICR)LRRC16A (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC16A
EVEXLRRC16A
GoPubMedLRRC16A
iHOPLRRC16A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:26:27 CEST 2017

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