Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LRRC2-AS1 (LRRC2 antisense RNA 1)

Identity

Alias_namesLUZP3
LUZPP1
LUZP3P
leucine zipper protein pseudogene 1
leucine zipper protein 3, pseudogene
Other alias
HGNC (Hugo) LRRC2-AS1
LocusID (NCBI) 83598
Atlas_Id 68607
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 46557398 and ends at 46559688 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LRRC2-AS1   15571
Cards
Entrez_Gene (NCBI)LRRC2-AS1  83598  LRRC2 antisense RNA 1
AliasesLUZP3; LUZP3P; LUZPP1
GeneCards (Weizmann)LRRC2-AS1
Ensembl hg19 (Hinxton)ENSG00000268324 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268324 [Gene_View]  chr3:46557398-46559688 [Contig_View]  LRRC2-AS1 [Vega]
ICGC DataPortalENSG00000268324
TCGA cBioPortalLRRC2-AS1
AceView (NCBI)LRRC2-AS1
Genatlas (Paris)LRRC2-AS1
WikiGenes83598
SOURCE (Princeton)LRRC2-AS1
Genetics Home Reference (NIH)LRRC2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC2-AS1  -     chr3:46557398-46559688 +  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC2-AS1  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblLRRC2-AS1 - 3p21.31 [CytoView hg19]  LRRC2-AS1 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBILRRC2-AS1 [Mapview hg19]  LRRC2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI954616 AJ312775 BX279889
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRRC2-AS1
Cluster EST : UnigeneHs.570630 [ NCBI ]
CGAP (NCI)Hs.570630
Alternative Splicing GalleryENSG00000268324
Gene ExpressionLRRC2-AS1 [ NCBI-GEO ]   LRRC2-AS1 [ EBI - ARRAY_EXPRESS ]   LRRC2-AS1 [ SEEK ]   LRRC2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)83598
GTEX Portal (Tissue expression)LRRC2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC2-AS1
DMDM Disease mutations83598
Blocks (Seattle)LRRC2-AS1
Human Protein AtlasENSG00000268324
IPIIPI00027783   
Protein Interaction databases
FunCoupENSG00000268324
BioGRIDLRRC2-AS1
STRING (EMBL)LRRC2-AS1
ZODIACLRRC2-AS1
Ontologies - Pathways
Huge Navigator LRRC2-AS1 [HugePedia]
snp3D : Map Gene to Disease83598
BioCentury BCIQLRRC2-AS1
ClinGenLRRC2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83598
Chemical/Pharm GKB GenePA30488
Clinical trialLRRC2-AS1
Miscellaneous
canSAR (ICR)LRRC2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC2-AS1
EVEXLRRC2-AS1
GoPubMedLRRC2-AS1
iHOPLRRC2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:24:49 CEST 2017

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