Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LRRC27 (leucine rich repeat containing 27)

Identity

Alias (NCBI)-
HGNC (Hugo) LRRC27
HGNC Alias symbKIAA1674
LocusID (NCBI) 80313
Atlas_Id 68604
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 132332193 and ends at 132381508 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HIST1H2BD (6p22.2) / LRRC27 (10q26.3)LRRC27 (10q26.3) / MAGI1 (3p14.1)RPAIN (17p13.2) / LRRC27 (10q26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LRRC27   29346
Cards
Entrez_Gene (NCBI)LRRC27    leucine rich repeat containing 27
Aliases
GeneCards (Weizmann)LRRC27
Ensembl hg19 (Hinxton)ENSG00000148814 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148814 [Gene_View]  ENSG00000148814 [Sequence]  chr10:132332193-132381508 [Contig_View]  LRRC27 [Vega]
ICGC DataPortalENSG00000148814
TCGA cBioPortalLRRC27
AceView (NCBI)LRRC27
Genatlas (Paris)LRRC27
SOURCE (Princeton)LRRC27
Genetics Home Reference (NIH)LRRC27
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC27  -     chr10:132332193-132381508 +  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC27  -     10q26.3   [Description]    (hg19-Feb_2009)
GoldenPathLRRC27 - 10q26.3 [CytoView hg19]  LRRC27 - 10q26.3 [CytoView hg38]
ImmunoBaseENSG00000148814
Genome Data Viewer NCBILRRC27 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB051461 AK091472 AK093250 AK097418 AK098652
RefSeq transcript (Entrez)NM_001143757 NM_001143758 NM_001143759 NM_001309474 NM_030626
Consensus coding sequences : CCDS (NCBI)LRRC27
Gene ExpressionLRRC27 [ NCBI-GEO ]   LRRC27 [ EBI - ARRAY_EXPRESS ]   LRRC27 [ SEEK ]   LRRC27 [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC27 [ Firebrowse - Broad ]
GenevisibleExpression of LRRC27 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80313
GTEX Portal (Tissue expression)LRRC27
Human Protein AtlasENSG00000148814-LRRC27 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC27
Human Protein Atlas [tissue]ENSG00000148814-LRRC27 [tissue]
HPRD17451
Protein Interaction databases
BioGRIDLRRC27
STRING (EMBL)LRRC27
ZODIACLRRC27
Ontologies - Pathways
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLRRC27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:06:14 CEST 2021
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.