LRRC28 (leucine rich repeat containing 28)

2014-11-01  

Identity

HGNC
LRRC28
LOCATION
15q26.3
LOCUSID
123355
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 123355
HGNC: 28355
Ensembl: ENSG00000168904

Variants:

dbSNP: 123355
ClinVar: 123355
TCGA: ENSG00000168904
COSMIC: LRRC28

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000168904ENST00000301981Q86X40
ENSG00000168904ENST00000331450Q8WUS2
ENSG00000168904ENST00000447360Q86X40
ENSG00000168904ENST00000447360A0A024RC88
ENSG00000168904ENST00000558172H0YM85
ENSG00000168904ENST00000558471H0YKS9
ENSG00000168904ENST00000558861H0YKF6
ENSG00000168904ENST00000558879H0YLR7
ENSG00000168904ENST00000559433H0YM55
ENSG00000168904ENST00000560236H0YNW4
ENSG00000168904ENST00000561253H0YK92
ENSG00000168904ENST00000561276H0YKM4

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

LRRC28 (leucine rich repeat containing 28)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/68605/lrrc28