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LRRC37A6P (leucine rich repeat containing 37 member A6, pseudogene)

Identity

Alias_symbol (synonym)LRRC37E
Other alias
HGNC (Hugo) LRRC37A6P
LocusID (NCBI) 387646
Atlas_Id 68620
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 27247304 and ends at 27250562 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LRRC37A6P   33746
Cards
Entrez_Gene (NCBI)LRRC37A6P  387646  leucine rich repeat containing 37 member A6, pseudogene
AliasesLRRC37E
GeneCards (Weizmann)LRRC37A6P
Ensembl hg19 (Hinxton)ENSG00000230445 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230445 [Gene_View]  chr10:27247304-27250562 [Contig_View]  LRRC37A6P [Vega]
ICGC DataPortalENSG00000230445
TCGA cBioPortalLRRC37A6P
AceView (NCBI)LRRC37A6P
Genatlas (Paris)LRRC37A6P
WikiGenes387646
SOURCE (Princeton)LRRC37A6P
Genetics Home Reference (NIH)LRRC37A6P
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC37A6P  -     chr10:27247304-27250562 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC37A6P  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblLRRC37A6P - 10p12.1 [CytoView hg19]  LRRC37A6P - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBILRRC37A6P [Mapview hg19]  LRRC37A6P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126872
RefSeq transcript (Entrez)NM_001006604
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRRC37A6P
Cluster EST : UnigeneHs.631829 [ NCBI ]
CGAP (NCI)Hs.631829
Alternative Splicing GalleryENSG00000230445
Gene ExpressionLRRC37A6P [ NCBI-GEO ]   LRRC37A6P [ EBI - ARRAY_EXPRESS ]   LRRC37A6P [ SEEK ]   LRRC37A6P [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC37A6P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387646
GTEX Portal (Tissue expression)LRRC37A6P
Human Protein AtlasENSG00000230445-LRRC37A6P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC37A6P
DMDM Disease mutations387646
Blocks (Seattle)LRRC37A6P
Human Protein Atlas [tissue]ENSG00000230445-LRRC37A6P [tissue]
HPRD17363
IPIIPI00413131   
Protein Interaction databases
FunCoupENSG00000230445
BioGRIDLRRC37A6P
STRING (EMBL)LRRC37A6P
ZODIACLRRC37A6P
Ontologies - Pathways
Huge Navigator LRRC37A6P [HugePedia]
snp3D : Map Gene to Disease387646
BioCentury BCIQLRRC37A6P
ClinGenLRRC37A6P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387646
Clinical trialLRRC37A6P
Miscellaneous
canSAR (ICR)LRRC37A6P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC37A6P
EVEXLRRC37A6P
GoPubMedLRRC37A6P
iHOPLRRC37A6P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:11:39 CET 2017

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