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LRRC37A8P (leucine rich repeat containing 37 member A8, pseudogene)

Identity

Other alias-
HGNC (Hugo) LRRC37A8P
LocusID (NCBI) 100533789
Atlas_Id 68621
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 35904220 and ends at 35911023 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LRRC37A8P   43793
Cards
Entrez_Gene (NCBI)LRRC37A8P  100533789  leucine rich repeat containing 37 member A8, pseudogene
Aliases
GeneCards (Weizmann)LRRC37A8P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:35904220-35911023 [Contig_View]  LRRC37A8P [Vega]
TCGA cBioPortalLRRC37A8P
AceView (NCBI)LRRC37A8P
Genatlas (Paris)LRRC37A8P
WikiGenes100533789
SOURCE (Princeton)LRRC37A8P
Genetics Home Reference (NIH)LRRC37A8P
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC37A8P  -     chr17:35904220-35911023 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC37A8P  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblLRRC37A8P - 17q12 [CytoView hg19]  LRRC37A8P - 17q12 [CytoView hg38]
Mapping of homologs : NCBILRRC37A8P [Mapview hg19]  LRRC37A8P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125932 AK128235 AL833376
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_028731 NT_187614
Consensus coding sequences : CCDS (NCBI)LRRC37A8P
Cluster EST : UnigeneHs.732260 [ NCBI ]
CGAP (NCI)Hs.732260
Gene ExpressionLRRC37A8P [ NCBI-GEO ]   LRRC37A8P [ EBI - ARRAY_EXPRESS ]   LRRC37A8P [ SEEK ]   LRRC37A8P [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC37A8P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100533789
GTEX Portal (Tissue expression)LRRC37A8P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZRG5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZRG5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZRG5
Splice isoforms : SwissVarQ6ZRG5
PhosPhoSitePlusQ6ZRG5
Domains : Interpro (EBI)LRRC37_N   
Domain families : Pfam (Sanger)LRRC37 (PF15779)   
Domain families : Pfam (NCBI)pfam15779   
Conserved Domain (NCBI)LRRC37A8P
DMDM Disease mutations100533789
Blocks (Seattle)LRRC37A8P
SuperfamilyQ6ZRG5
Peptide AtlasQ6ZRG5
Protein Interaction databases
DIP (DOE-UCLA)Q6ZRG5
IntAct (EBI)Q6ZRG5
BioGRIDLRRC37A8P
STRING (EMBL)LRRC37A8P
ZODIACLRRC37A8P
Ontologies - Pathways
QuickGOQ6ZRG5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLRRC37A8P
Atlas of Cancer Signalling NetworkLRRC37A8P
Wikipedia pathwaysLRRC37A8P
Orthology - Evolution
OrthoDB100533789
Phylogenetic Trees/Animal Genes : TreeFamLRRC37A8P
HOVERGENQ6ZRG5
HOGENOMQ6ZRG5
Homologs : HomoloGeneLRRC37A8P
Homology/Alignments : Family Browser (UCSC)LRRC37A8P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLRRC37A8P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LRRC37A8P
dbVarLRRC37A8P
ClinVarLRRC37A8P
1000_GenomesLRRC37A8P 
Exome Variant ServerLRRC37A8P
ExAC (Exome Aggregation Consortium)LRRC37A8P (select the gene name)
Genetic variants : HAPMAP100533789
Genomic Variants (DGV)LRRC37A8P [DGVbeta]
DECIPHERLRRC37A8P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLRRC37A8P 
Mutations
ICGC Data PortalLRRC37A8P 
TCGA Data PortalLRRC37A8P 
Broad Tumor PortalLRRC37A8P
OASIS PortalLRRC37A8P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDLRRC37A8P
BioMutasearch LRRC37A8P
DgiDB (Drug Gene Interaction Database)LRRC37A8P
DoCM (Curated mutations)LRRC37A8P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LRRC37A8P (select a term)
intoGenLRRC37A8P
Cancer3DLRRC37A8P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLRRC37A8P
Genetic Testing Registry LRRC37A8P
NextProtQ6ZRG5 [Medical]
TSGene100533789
GENETestsLRRC37A8P
Target ValidationLRRC37A8P
Huge Navigator LRRC37A8P [HugePedia]
snp3D : Map Gene to Disease100533789
BioCentury BCIQLRRC37A8P
ClinGenLRRC37A8P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533789
Clinical trialLRRC37A8P
Miscellaneous
canSAR (ICR)LRRC37A8P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC37A8P
EVEXLRRC37A8P
GoPubMedLRRC37A8P
iHOPLRRC37A8P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:24:53 CEST 2017

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