Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LRRC37BP1 (leucine rich repeat containing 37B pseudogene 1)

Identity

Alias_namesLRRC37B2
leucine rich repeat containing 37, member B2
Alias_symbol (synonym)DKFZp667M2411
Other alias
HGNC (Hugo) LRRC37BP1
LocusID (NCBI) 147172
Atlas_Id 78120
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 28959547 and ends at 28962484 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LRRC37BP1 (17q11.2) / AGK (7q34)SMURF2P1 () / LRRC37BP1 (17q11.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LRRC37BP1   25390
Cards
Entrez_Gene (NCBI)LRRC37BP1  147172  leucine rich repeat containing 37B pseudogene 1
AliasesLRRC37B2
GeneCards (Weizmann)LRRC37BP1
Ensembl hg19 (Hinxton) [Gene_View]  chr17:28959547-28962484 [Contig_View]  LRRC37BP1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:28959547-28962484 [Contig_View]  LRRC37BP1 [Vega]
TCGA cBioPortalLRRC37BP1
AceView (NCBI)LRRC37BP1
Genatlas (Paris)LRRC37BP1
WikiGenes147172
SOURCE (Princeton)LRRC37BP1
Genetics Home Reference (NIH)LRRC37BP1
Genomic and cartography
GoldenPath hg19 (UCSC)LRRC37BP1  -     chr17:28959547-28962484 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LRRC37BP1  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblLRRC37BP1 - 17q11.2 [CytoView hg19]  LRRC37BP1 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBILRRC37BP1 [Mapview hg19]  LRRC37BP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124001 AK124759 AK125981 AL359623 AL713754
RefSeq transcript (Entrez)NM_207323
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_046674 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)LRRC37BP1
Cluster EST : UnigeneHs.568209 [ NCBI ]
CGAP (NCI)Hs.568209
Gene ExpressionLRRC37BP1 [ NCBI-GEO ]   LRRC37BP1 [ EBI - ARRAY_EXPRESS ]   LRRC37BP1 [ SEEK ]   LRRC37BP1 [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC37BP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)147172
GTEX Portal (Tissue expression)LRRC37BP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC37BP1
DMDM Disease mutations147172
Blocks (Seattle)LRRC37BP1
HPRD13217
IPIIPI00794775   
Protein Interaction databases
BioGRIDLRRC37BP1
STRING (EMBL)LRRC37BP1
ZODIACLRRC37BP1
Ontologies - Pathways
Huge Navigator LRRC37BP1 [HugePedia]
snp3D : Map Gene to Disease147172
BioCentury BCIQLRRC37BP1
ClinGenLRRC37BP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147172
Clinical trialLRRC37BP1
Miscellaneous
canSAR (ICR)LRRC37BP1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC37BP1
EVEXLRRC37BP1
GoPubMedLRRC37BP1
iHOPLRRC37BP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:06 CET 2017

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