Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LRRC3DN (LRRC3 downstream neighbor (non-protein coding))

Identity

Alias_namesC21orf30
chromosome 21 open reading frame 30
Alias_symbol (synonym)DKFZP434C128
Other alias
HGNC (Hugo) LRRC3DN
LocusID (NCBI) 54083
Atlas_Id 68626
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 45879814 and ends at 45882079 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LRRC3DN   1270
Cards
Entrez_Gene (NCBI)LRRC3DN  54083  LRRC3 downstream neighbor (non-protein coding)
AliasesC21orf30
GeneCards (Weizmann)LRRC3DN
Ensembl hg19 (Hinxton) [Gene_View]  chr21:45879814-45882079 [Contig_View]  LRRC3DN [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:45879814-45882079 [Contig_View]  LRRC3DN [Vega]
TCGA cBioPortalLRRC3DN
AceView (NCBI)LRRC3DN
Genatlas (Paris)LRRC3DN
WikiGenes54083
SOURCE (Princeton)LRRC3DN
Genetics Home Reference (NIH)LRRC3DN
Genomic and cartography
GoldenPath hg19 (UCSC)LRRC3DN  -     chr21:45879814-45882079 +  21q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LRRC3DN  -     21q22.3   [Description]    (hg38-Dec_2013)
EnsemblLRRC3DN - 21q22.3 [CytoView hg19]  LRRC3DN - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILRRC3DN [Mapview hg19]  LRRC3DN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL117578
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929427
Consensus coding sequences : CCDS (NCBI)LRRC3DN
Cluster EST : UnigeneHs.542533 [ NCBI ]
CGAP (NCI)Hs.542533
Gene ExpressionLRRC3DN [ NCBI-GEO ]   LRRC3DN [ EBI - ARRAY_EXPRESS ]   LRRC3DN [ SEEK ]   LRRC3DN [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC3DN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54083
GTEX Portal (Tissue expression)LRRC3DN
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC3DN
DMDM Disease mutations54083
Blocks (Seattle)LRRC3DN
IPIIPI00004827   
Protein Interaction databases
BioGRIDLRRC3DN
STRING (EMBL)LRRC3DN
ZODIACLRRC3DN
Ontologies - Pathways
Huge Navigator LRRC3DN [HugePedia]
snp3D : Map Gene to Disease54083
BioCentury BCIQLRRC3DN
ClinGenLRRC3DN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54083
Chemical/Pharm GKB GenePA25825
Clinical trialLRRC3DN
Miscellaneous
canSAR (ICR)LRRC3DN (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC3DN
EVEXLRRC3DN
GoPubMedLRRC3DN
iHOPLRRC3DN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:27:07 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.