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LRRC41 (leucine rich repeat containing 41)

Identity

Alias (NCBI)MUF1
PP7759
HGNC (Hugo) LRRC41
HGNC Alias symbMUF1
LocusID (NCBI) 10489
Atlas_Id 54432
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 46278400 and ends at 46303366 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LRRC41 (1p34.1) / FAM159A (1p32.3)LRRC41 (1p34.1) / SERPINB6 (6p25.2)MTCL1 (18p11.22) / LRRC41 (1p34.1)
NANS (9q22.33) / LRRC41 (1p34.1)PIK3R3 (1p34.1) / LRRC41 (1p34.1)RAD54L (1p34.1) / LRRC41 (1p34.1)
CCDC165 LRRC41 1p34.1LRRC41 1p34.1 / FAM159A 1p32.3PIK3R3 1p34.1 / LRRC41 1p34.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)LRRC41   16917
Cards
Entrez_Gene (NCBI)LRRC41    leucine rich repeat containing 41
AliasesMUF1; PP7759
GeneCards (Weizmann)LRRC41
Ensembl hg19 (Hinxton)ENSG00000132128 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132128 [Gene_View]  ENSG00000132128 [Sequence]  chr1:46278400-46303366 [Contig_View]  LRRC41 [Vega]
ICGC DataPortalENSG00000132128
TCGA cBioPortalLRRC41
AceView (NCBI)LRRC41
Genatlas (Paris)LRRC41
SOURCE (Princeton)LRRC41
Genetics Home Reference (NIH)LRRC41
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC41  -     chr1:46278400-46303366 -  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC41  -     1p34.1   [Description]    (hg19-Feb_2009)
GoldenPathLRRC41 - 1p34.1 [CytoView hg19]  LRRC41 - 1p34.1 [CytoView hg38]
ImmunoBaseENSG00000132128
Genome Data Viewer NCBILRRC41 [Mapview hg19]  
OMIM618753   
Gene and transcription
Genbank (Entrez)AF370430 AK024051 AK125827 AK223420 AK291283
RefSeq transcript (Entrez)NM_006369
Consensus coding sequences : CCDS (NCBI)LRRC41
Gene ExpressionLRRC41 [ NCBI-GEO ]   LRRC41 [ EBI - ARRAY_EXPRESS ]   LRRC41 [ SEEK ]   LRRC41 [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC41 [ Firebrowse - Broad ]
GenevisibleExpression of LRRC41 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10489
GTEX Portal (Tissue expression)LRRC41
Human Protein AtlasENSG00000132128-LRRC41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15345   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15345  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15345
PhosPhoSitePlusQ15345
Domains : Interpro (EBI)Leu_rpt_41    LRR_dom_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC41
SuperfamilyQ15345
AlphaFold pdb e-kbQ15345   
Human Protein Atlas [tissue]ENSG00000132128-LRRC41 [tissue]
HPRD10102
Protein Interaction databases
DIP (DOE-UCLA)Q15345
IntAct (EBI)Q15345
BioGRIDLRRC41
STRING (EMBL)LRRC41
ZODIACLRRC41
Ontologies - Pathways
QuickGOQ15345
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytosol  membrane  protein ubiquitination  identical protein binding  post-translational protein modification  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytosol  membrane  protein ubiquitination  identical protein binding  post-translational protein modification  
NDEx NetworkLRRC41
Atlas of Cancer Signalling NetworkLRRC41
Wikipedia pathwaysLRRC41
Orthology - Evolution
OrthoDB10489
GeneTree (enSembl)ENSG00000132128
Phylogenetic Trees/Animal Genes : TreeFamLRRC41
Homologs : HomoloGeneLRRC41
Homology/Alignments : Family Browser (UCSC)LRRC41
Gene fusions - Rearrangements
Fusion : MitelmanLRRC41/FAM159A [1p34.1/1p32.3]  
Fusion : MitelmanMTCL1/LRRC41 [18p11.22/1p34.1]  
Fusion : MitelmanPIK3R3/LRRC41 [1p34.1/1p34.1]  
Fusion : QuiverLRRC41
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLRRC41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LRRC41
dbVarLRRC41
ClinVarLRRC41
MonarchLRRC41
1000_GenomesLRRC41 
Exome Variant ServerLRRC41
GNOMAD BrowserENSG00000132128
Varsome BrowserLRRC41
ACMGLRRC41 variants
VarityQ15345
Genomic Variants (DGV)LRRC41 [DGVbeta]
DECIPHERLRRC41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLRRC41 
Mutations
ICGC Data PortalLRRC41 
TCGA Data PortalLRRC41 
Broad Tumor PortalLRRC41
OASIS PortalLRRC41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLRRC41  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DLRRC41
Mutations and Diseases : HGMDLRRC41
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaLRRC41
DgiDB (Drug Gene Interaction Database)LRRC41
DoCM (Curated mutations)LRRC41
CIViC (Clinical Interpretations of Variants in Cancer)LRRC41
Cancer3DLRRC41
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618753   
Orphanet
DisGeNETLRRC41
MedgenLRRC41
Genetic Testing Registry LRRC41
NextProtQ15345 [Medical]
GENETestsLRRC41
Target ValidationLRRC41
Huge Navigator LRRC41 [HugePedia]
ClinGenLRRC41
Clinical trials, drugs, therapy
MyCancerGenomeLRRC41
Protein Interactions : CTDLRRC41
Pharm GKB GenePA142671529
PharosQ15345
Clinical trialLRRC41
Miscellaneous
canSAR (ICR)LRRC41
HarmonizomeLRRC41
DataMed IndexLRRC41
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLRRC41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:17:08 CEST 2021
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