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LRRC74A (leucine rich repeat containing 74A)

Identity

Alias_namesC14orf166B
LRRC74
chromosome 14 open reading frame 166B
LRRC74
leucine rich repeat containing 74
Other alias
HGNC (Hugo) LRRC74A
LocusID (NCBI) 145497
Atlas_Id 68651
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 76826382 and ends at 76870302 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CTNNA3 (10q21.3) / LRRC74A (14q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LRRC74A   23346
Cards
Entrez_Gene (NCBI)LRRC74A  145497  leucine rich repeat containing 74A
AliasesC14orf166B; LRRC74
GeneCards (Weizmann)LRRC74A
Ensembl hg19 (Hinxton)ENSG00000100565 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100565 [Gene_View]  chr14:76826382-76870302 [Contig_View]  LRRC74A [Vega]
ICGC DataPortalENSG00000100565
TCGA cBioPortalLRRC74A
AceView (NCBI)LRRC74A
Genatlas (Paris)LRRC74A
WikiGenes145497
SOURCE (Princeton)LRRC74A
Genetics Home Reference (NIH)LRRC74A
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC74A  -     chr14:76826382-76870302 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC74A  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblLRRC74A - 14q24.3 [CytoView hg19]  LRRC74A - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBILRRC74A [Mapview hg19]  LRRC74A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058106 AK125722 AK301762 BC062799 BC121159
RefSeq transcript (Entrez)NM_194287
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRRC74A
Cluster EST : UnigeneHs.147276 [ NCBI ]
CGAP (NCI)Hs.147276
Alternative Splicing GalleryENSG00000100565
Gene ExpressionLRRC74A [ NCBI-GEO ]   LRRC74A [ EBI - ARRAY_EXPRESS ]   LRRC74A [ SEEK ]   LRRC74A [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC74A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145497
GTEX Portal (Tissue expression)LRRC74A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VAA2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0VAA2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0VAA2
Splice isoforms : SwissVarQ0VAA2
PhosPhoSitePlusQ0VAA2
Domains : Interpro (EBI)EF-hand-dom_pair    L_dom-like    Leu-rich_rpt   
Domain families : Pfam (Sanger)LRR_6 (PF13516)   
Domain families : Pfam (NCBI)pfam13516   
Conserved Domain (NCBI)LRRC74A
DMDM Disease mutations145497
Blocks (Seattle)LRRC74A
SuperfamilyQ0VAA2
Human Protein AtlasENSG00000100565
Peptide AtlasQ0VAA2
HPRD12621
IPIIPI00853079   IPI00867705   IPI00909790   IPI00008147   IPI01024947   IPI01026569   IPI00853182   
Protein Interaction databases
DIP (DOE-UCLA)Q0VAA2
IntAct (EBI)Q0VAA2
FunCoupENSG00000100565
BioGRIDLRRC74A
STRING (EMBL)LRRC74A
ZODIACLRRC74A
Ontologies - Pathways
QuickGOQ0VAA2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLRRC74A
Atlas of Cancer Signalling NetworkLRRC74A
Wikipedia pathwaysLRRC74A
Orthology - Evolution
OrthoDB145497
GeneTree (enSembl)ENSG00000100565
Phylogenetic Trees/Animal Genes : TreeFamLRRC74A
HOVERGENQ0VAA2
HOGENOMQ0VAA2
Homologs : HomoloGeneLRRC74A
Homology/Alignments : Family Browser (UCSC)LRRC74A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLRRC74A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LRRC74A
dbVarLRRC74A
ClinVarLRRC74A
1000_GenomesLRRC74A 
Exome Variant ServerLRRC74A
ExAC (Exome Aggregation Consortium)LRRC74A (select the gene name)
Genetic variants : HAPMAP145497
Genomic Variants (DGV)LRRC74A [DGVbeta]
DECIPHERLRRC74A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLRRC74A 
Mutations
ICGC Data PortalLRRC74A 
TCGA Data PortalLRRC74A 
Broad Tumor PortalLRRC74A
OASIS PortalLRRC74A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDLRRC74A
BioMutasearch LRRC74A
DgiDB (Drug Gene Interaction Database)LRRC74A
DoCM (Curated mutations)LRRC74A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LRRC74A (select a term)
intoGenLRRC74A
Cancer3DLRRC74A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLRRC74A
Genetic Testing Registry LRRC74A
NextProtQ0VAA2 [Medical]
TSGene145497
GENETestsLRRC74A
Target ValidationLRRC74A
Huge Navigator LRRC74A [HugePedia]
snp3D : Map Gene to Disease145497
BioCentury BCIQLRRC74A
ClinGenLRRC74A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145497
Chemical/Pharm GKB GenePA134862662
Clinical trialLRRC74A
Miscellaneous
canSAR (ICR)LRRC74A (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC74A
EVEXLRRC74A
GoPubMedLRRC74A
iHOPLRRC74A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:26:35 CEST 2017

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