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LRRC75B (leucine rich repeat containing 75B)

Identity

Alias_namesC22orf36
FAM211B
chromosome 22 open reading frame 36
family with sequence similarity 211, member B
Alias_symbol (synonym)MGC131773
Other alias
HGNC (Hugo) LRRC75B
LocusID (NCBI) 388886
Atlas_Id 68655
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 24585623 and ends at 24593068 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LRRC75B   33155
Cards
Entrez_Gene (NCBI)LRRC75B  388886  leucine rich repeat containing 75B
AliasesC22orf36; FAM211B
GeneCards (Weizmann)LRRC75B
Ensembl hg19 (Hinxton)ENSG00000178026 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178026 [Gene_View]  chr22:24585623-24593068 [Contig_View]  LRRC75B [Vega]
ICGC DataPortalENSG00000178026
TCGA cBioPortalLRRC75B
AceView (NCBI)LRRC75B
Genatlas (Paris)LRRC75B
WikiGenes388886
SOURCE (Princeton)LRRC75B
Genetics Home Reference (NIH)LRRC75B
Genomic and cartography
GoldenPath hg38 (UCSC)LRRC75B  -     chr22:24585623-24593068 -  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LRRC75B  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblLRRC75B - 22q11.23 [CytoView hg19]  LRRC75B - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBILRRC75B [Mapview hg19]  LRRC75B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097054 BC017595 BC032388 BC108684 BI544432
RefSeq transcript (Entrez)NM_207644
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LRRC75B
Cluster EST : UnigeneHs.113314 [ NCBI ]
CGAP (NCI)Hs.113314
Alternative Splicing GalleryENSG00000178026
Gene ExpressionLRRC75B [ NCBI-GEO ]   LRRC75B [ EBI - ARRAY_EXPRESS ]   LRRC75B [ SEEK ]   LRRC75B [ MEM ]
Gene Expression Viewer (FireBrowse)LRRC75B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388886
GTEX Portal (Tissue expression)LRRC75B
Human Protein AtlasENSG00000178026-LRRC75B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2VPJ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2VPJ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2VPJ9
Splice isoforms : SwissVarQ2VPJ9
PhosPhoSitePlusQ2VPJ9
Domains : Interpro (EBI)L_dom-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LRRC75B
DMDM Disease mutations388886
Blocks (Seattle)LRRC75B
SuperfamilyQ2VPJ9
Human Protein Atlas [tissue]ENSG00000178026-LRRC75B [tissue]
Peptide AtlasQ2VPJ9
HPRD14208
IPIIPI00384730   IPI00746581   IPI00816830   IPI00879685   IPI00877828   
Protein Interaction databases
DIP (DOE-UCLA)Q2VPJ9
IntAct (EBI)Q2VPJ9
FunCoupENSG00000178026
BioGRIDLRRC75B
STRING (EMBL)LRRC75B
ZODIACLRRC75B
Ontologies - Pathways
QuickGOQ2VPJ9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLRRC75B
Atlas of Cancer Signalling NetworkLRRC75B
Wikipedia pathwaysLRRC75B
Orthology - Evolution
OrthoDB388886
GeneTree (enSembl)ENSG00000178026
Phylogenetic Trees/Animal Genes : TreeFamLRRC75B
HOVERGENQ2VPJ9
HOGENOMQ2VPJ9
Homologs : HomoloGeneLRRC75B
Homology/Alignments : Family Browser (UCSC)LRRC75B
Gene fusions - Rearrangements
Fusion: Tumor Portal LRRC75B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLRRC75B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LRRC75B
dbVarLRRC75B
ClinVarLRRC75B
1000_GenomesLRRC75B 
Exome Variant ServerLRRC75B
ExAC (Exome Aggregation Consortium)ENSG00000178026
GNOMAD BrowserENSG00000178026
Genetic variants : HAPMAP388886
Genomic Variants (DGV)LRRC75B [DGVbeta]
DECIPHERLRRC75B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLRRC75B 
Mutations
ICGC Data PortalLRRC75B 
TCGA Data PortalLRRC75B 
Broad Tumor PortalLRRC75B
OASIS PortalLRRC75B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDLRRC75B
BioMutasearch LRRC75B
DgiDB (Drug Gene Interaction Database)LRRC75B
DoCM (Curated mutations)LRRC75B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LRRC75B (select a term)
intoGenLRRC75B
Cancer3DLRRC75B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLRRC75B
Genetic Testing Registry LRRC75B
NextProtQ2VPJ9 [Medical]
TSGene388886
GENETestsLRRC75B
Target ValidationLRRC75B
Huge Navigator LRRC75B [HugePedia]
snp3D : Map Gene to Disease388886
BioCentury BCIQLRRC75B
ClinGenLRRC75B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388886
Chemical/Pharm GKB GenePA162378982
Clinical trialLRRC75B
Miscellaneous
canSAR (ICR)LRRC75B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLRRC75B
EVEXLRRC75B
GoPubMedLRRC75B
iHOPLRRC75B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:11:46 CET 2017

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