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LTB4R (leukotriene B4 receptor)

Identity

Other namesBLT1
BLTR
CMKRL1
GPR16
LTB4R1
LTBR1
P2RY7
P2Y7
HGNC (Hugo) LTB4R
LocusID (NCBI) 1241
Location 14q12
Location_base_pair Starts at 24780705 and ends at 24787242 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LTB4R   6713
Entrez_Gene (NCBI)LTB4R  1241  leukotriene B4 receptor
Cards
GeneCards (Weizmann)LTB4R
Ensembl (Hinxton)ENSG00000213903 [Gene_View]  chr14:24780705-24787242 [Contig_View]  LTB4R [Vega]
AceView (NCBI)LTB4R
Genatlas (Paris)LTB4R
SOURCE (Stanford)NM_001143919 NM_181657
Genomic and cartography
GoldenPath (UCSC)LTB4R  -  14q12   chr14:24780705-24787242 +  14q12   [Description]    (hg19-Feb_2009)
EnsemblLTB4R - 14q12 [CytoView]
Mapping of homologs : NCBILTB4R [Mapview]
OMIM601531   
Gene and transcription
Genbank (Entrez)AA021034 AW242534 BC004545 BQ182452 BT007267
RefSeq transcript (SRS)NM_001143919 NM_181657
RefSeq transcript (Entrez)NM_001143919 NM_181657
RefSeq genomic (SRS)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838110 NW_004078079
RefSeq genomic (Entrez)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838110 NW_004078079
Consensus coding sequences : CCDS (NCBI)LTB4R
Cluster EST : UnigeneHs.567248 [ SRS ] Hs.567248 [ NCBI ]
CGAP (NCI)Hs.567248
Alternative Splicing : Fast-db (Paris)GSHG0033219
Alternative Splicing GalleryENSG00000213903
Gene ExpressionLTB4R [ NCBI-GEO ]   LTB4R [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15722 (SRS) Q15722 (Uniprot)
NextProtQ15722
With graphics : InterProQ15722
Splice isoforms : SwissVarQ15722(Swissvar)
Domaine pattern : Prosite (SRS)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (SRS)7TM_GPCR_Rhodpsn    GPCR_Rhodpsn_supfam    Leukotriene_B4_rcpt    Leukotriene_B4_typ-1_rcpt   
Domains : Interpro (EBI)7TM_GPCR_Rhodpsn    GPCR_Rhodpsn_supfam    Leukotriene_B4_rcpt    Leukotriene_B4_typ-1_rcpt   
Related proteins : CluSTrQ15722
Domain families : Pfam (SRS)7tm_1 (PF00001)   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
DMDM1241
Blocks (Seattle)Q15722
Human Protein AtlasENSG00000213903
HPRD03320
IPIIPI00019382   IPI01025978   IPI01026261   
Protein Interaction databases
DIP (DOE-UCLA)Q15722
IntAct (EBI)Q15722
FunCoupENSG00000213903
REACTOMELTB4R
Protein Interaction Database1241
BioGRIDLTB4R
InParanoidQ15722
Interologous Interaction database Q15722
IntegromeDBLTB4R
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)LTB4R
SNP (GeneSNP Utah)LTB4R
SNP : HGBaseLTB4R
Genetic variants : HAPMAPLTB4R
Somatic Mutations in Cancer : COSMICLTB4R 
CONAN: Copy Number AnalysisLTB4R 
Mutations and Diseases : HGMDLTB4R
OMIM601531   
GENETests601531   
Disease Genetic AssociationLTB4R
Huge Navigator LTB4R [HugePedia]  LTB4R [HugeCancerGEM]
Genomic VariantsLTB4R  LTB4R [DGVbeta]
snp3D : Map Gene to Disease1241
General knowledge
Homologs : HomoloGeneLTB4R
Homology/Alignments : Family Browser (UCSC)LTB4R
Phylogenetic Trees/Animal Genes : TreeFamLTB4R
Chemical/Protein Interactions : CTD1241
Chemical/Pharm GKB GenePA30476
Clinical trialLTB4R
Cancer Resource (Charite)ENSG00000213903
Ontology : AmiGOnucleotide binding  leukotriene B4 receptor activity  leukotriene receptor activity  plasma membrane  integral to plasma membrane  cellular component movement  muscle contraction  inflammatory response  immune response  G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  
Ontology : EGO-EBInucleotide binding  leukotriene B4 receptor activity  leukotriene receptor activity  plasma membrane  integral to plasma membrane  cellular component movement  muscle contraction  inflammatory response  immune response  G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  
Pathways : KEGGNeuroactive ligand-receptor interaction
Other databases
Probes
Litterature
PubMed51 Pubmed reference(s) in Entrez
PubGeneLTB4R
iHOPLTB4R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:30:39 CEST 2013
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