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LUADT1 (lung adenocarcinoma associated transcript 1)

Identity

Other alias-
HGNC (Hugo) LUADT1
LocusID (NCBI) 106182249
Atlas_Id 55395
Location 6q24.3  [Link to chromosome band 6q24]
Location_base_pair Starts at 147158925 and ends at 147180992 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUADT1   51845
Cards
Entrez_Gene (NCBI)LUADT1  106182249  lung adenocarcinoma associated transcript 1
Aliases
GeneCards (Weizmann)LUADT1
Ensembl hg19 (Hinxton)ENSG00000196634 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196634 [Gene_View]  ENSG00000196634 [Sequence]  chr6:147158925-147180992 [Contig_View]  LUADT1 [Vega]
ICGC DataPortalENSG00000196634
TCGA cBioPortalLUADT1
AceView (NCBI)LUADT1
Genatlas (Paris)LUADT1
WikiGenes106182249
SOURCE (Princeton)LUADT1
Genetics Home Reference (NIH)LUADT1
Genomic and cartography
GoldenPath hg38 (UCSC)LUADT1  -     chr6:147158925-147180992 +  6q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LUADT1  -     6q24.3   [Description]    (hg19-Feb_2009)
EnsemblLUADT1 - 6q24.3 [CytoView hg19]  LUADT1 - 6q24.3 [CytoView hg38]
Mapping of homologs : NCBILUADT1 [Mapview hg19]  LUADT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)N24013 N35358
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LUADT1
Cluster EST : UnigeneHs.575390 [ NCBI ]
CGAP (NCI)Hs.575390
Alternative Splicing GalleryENSG00000196634
Gene ExpressionLUADT1 [ NCBI-GEO ]   LUADT1 [ EBI - ARRAY_EXPRESS ]   LUADT1 [ SEEK ]   LUADT1 [ MEM ]
Gene Expression Viewer (FireBrowse)LUADT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106182249
GTEX Portal (Tissue expression)LUADT1
Human Protein AtlasENSG00000196634-LUADT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUADT1
DMDM Disease mutations106182249
Blocks (Seattle)LUADT1
Human Protein Atlas [tissue]ENSG00000196634-LUADT1 [tissue]
Protein Interaction databases
FunCoupENSG00000196634
BioGRIDLUADT1
STRING (EMBL)LUADT1
ZODIACLUADT1
Ontologies - Pathways
Huge Navigator LUADT1 [HugePedia]
snp3D : Map Gene to Disease106182249
BioCentury BCIQLUADT1
ClinGenLUADT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106182249
Clinical trialLUADT1
Miscellaneous
canSAR (ICR)LUADT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUADT1
EVEXLUADT1
GoPubMedLUADT1
iHOPLUADT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:18:08 CET 2018

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