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LUCAT1 (lung cancer associated transcript 1 (non-protein coding))

Identity

Alias_symbol (synonym)SCAL1
Other alias
HGNC (Hugo) LUCAT1
LocusID (NCBI) 100505994
Atlas_Id 53360
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 90598803 and ends at 90610219 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUCAT1   48498
Cards
Entrez_Gene (NCBI)LUCAT1  100505994  lung cancer associated transcript 1 (non-protein coding)
AliasesSCAL1
GeneCards (Weizmann)LUCAT1
Ensembl hg19 (Hinxton)ENSG00000248323 [Gene_View]  chr5:90598803-90610219 [Contig_View]  LUCAT1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248323 [Gene_View]  chr5:90598803-90610219 [Contig_View]  LUCAT1 [Vega]
ICGC DataPortalENSG00000248323
TCGA cBioPortalLUCAT1
AceView (NCBI)LUCAT1
Genatlas (Paris)LUCAT1
WikiGenes100505994
SOURCE (Princeton)LUCAT1
Genetics Home Reference (NIH)LUCAT1
Genomic and cartography
GoldenPath hg19 (UCSC)LUCAT1  -     chr5:90598803-90610219 -  5q14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LUCAT1  -     5q14.3   [Description]    (hg38-Dec_2013)
EnsemblLUCAT1 - 5q14.3 [CytoView hg19]  LUCAT1 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBILUCAT1 [Mapview hg19]  LUCAT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091866 BQ232757 DA373878 DA375303 DA713469
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929322
Consensus coding sequences : CCDS (NCBI)LUCAT1
Cluster EST : UnigeneHs.745403 [ NCBI ]
CGAP (NCI)Hs.745403
Alternative Splicing GalleryENSG00000248323
Gene ExpressionLUCAT1 [ NCBI-GEO ]   LUCAT1 [ EBI - ARRAY_EXPRESS ]   LUCAT1 [ SEEK ]   LUCAT1 [ MEM ]
Gene Expression Viewer (FireBrowse)LUCAT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505994
GTEX Portal (Tissue expression)LUCAT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUCAT1
DMDM Disease mutations100505994
Blocks (Seattle)LUCAT1
Human Protein AtlasENSG00000248323
Protein Interaction databases
FunCoupENSG00000248323
BioGRIDLUCAT1
STRING (EMBL)LUCAT1
ZODIACLUCAT1
Ontologies - Pathways
Huge Navigator LUCAT1 [HugePedia]
snp3D : Map Gene to Disease100505994
BioCentury BCIQLUCAT1
ClinGenLUCAT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505994
Clinical trialLUCAT1
Miscellaneous
canSAR (ICR)LUCAT1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUCAT1
EVEXLUCAT1
GoPubMedLUCAT1
iHOPLUCAT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:08:03 CEST 2017

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