Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LURAP1 (leucine rich adaptor protein 1)

Identity

Alias_namesC1orf190
chromosome 1 open reading frame 190
Alias_symbol (synonym)FLJ25163
LRAP35a
Other aliasLRP35A
HGNC (Hugo) LURAP1
LocusID (NCBI) 541468
Atlas_Id 68701
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 46203334 and ends at 46221256 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LURAP1   32327
Cards
Entrez_Gene (NCBI)LURAP1  541468  leucine rich adaptor protein 1
AliasesC1orf190; LRAP35a; LRP35A
GeneCards (Weizmann)LURAP1
Ensembl hg19 (Hinxton)ENSG00000171357 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171357 [Gene_View]  chr1:46203334-46221256 [Contig_View]  LURAP1 [Vega]
ICGC DataPortalENSG00000171357
TCGA cBioPortalLURAP1
AceView (NCBI)LURAP1
Genatlas (Paris)LURAP1
WikiGenes541468
SOURCE (Princeton)LURAP1
Genetics Home Reference (NIH)LURAP1
Genomic and cartography
GoldenPath hg38 (UCSC)LURAP1  -     chr1:46203334-46221256 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LURAP1  -     1p34.1   [Description]    (hg19-Feb_2009)
EnsemblLURAP1 - 1p34.1 [CytoView hg19]  LURAP1 - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBILURAP1 [Mapview hg19]  LURAP1 [Mapview hg38]
OMIM616129   
Gene and transcription
Genbank (Entrez)AI077554 AK057892 BC034422 BX370151 CR746264
RefSeq transcript (Entrez)NM_001013615
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LURAP1
Cluster EST : UnigeneHs.568642 [ NCBI ]
CGAP (NCI)Hs.568642
Alternative Splicing GalleryENSG00000171357
Gene ExpressionLURAP1 [ NCBI-GEO ]   LURAP1 [ EBI - ARRAY_EXPRESS ]   LURAP1 [ SEEK ]   LURAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)LURAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)541468
GTEX Portal (Tissue expression)LURAP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LR2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LR2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LR2
Splice isoforms : SwissVarQ96LR2
PhosPhoSitePlusQ96LR2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LURAP1
DMDM Disease mutations541468
Blocks (Seattle)LURAP1
SuperfamilyQ96LR2
Human Protein AtlasENSG00000171357
Peptide AtlasQ96LR2
HPRD18478
IPIIPI00065181   
Protein Interaction databases
DIP (DOE-UCLA)Q96LR2
IntAct (EBI)Q96LR2
FunCoupENSG00000171357
BioGRIDLURAP1
STRING (EMBL)LURAP1
ZODIACLURAP1
Ontologies - Pathways
QuickGOQ96LR2
Ontology : AmiGOpositive regulation of cytokine production  protein binding  cytoplasm  cell migration  actomyosin structure organization  actomyosin  positive regulation of I-kappaB kinase/NF-kappaB signaling  
Ontology : EGO-EBIpositive regulation of cytokine production  protein binding  cytoplasm  cell migration  actomyosin structure organization  actomyosin  positive regulation of I-kappaB kinase/NF-kappaB signaling  
NDEx NetworkLURAP1
Atlas of Cancer Signalling NetworkLURAP1
Wikipedia pathwaysLURAP1
Orthology - Evolution
OrthoDB541468
GeneTree (enSembl)ENSG00000171357
Phylogenetic Trees/Animal Genes : TreeFamLURAP1
HOVERGENQ96LR2
HOGENOMQ96LR2
Homologs : HomoloGeneLURAP1
Homology/Alignments : Family Browser (UCSC)LURAP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLURAP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LURAP1
dbVarLURAP1
ClinVarLURAP1
1000_GenomesLURAP1 
Exome Variant ServerLURAP1
ExAC (Exome Aggregation Consortium)LURAP1 (select the gene name)
Genetic variants : HAPMAP541468
Genomic Variants (DGV)LURAP1 [DGVbeta]
DECIPHERLURAP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLURAP1 
Mutations
ICGC Data PortalLURAP1 
TCGA Data PortalLURAP1 
Broad Tumor PortalLURAP1
OASIS PortalLURAP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDLURAP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LURAP1
DgiDB (Drug Gene Interaction Database)LURAP1
DoCM (Curated mutations)LURAP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LURAP1 (select a term)
intoGenLURAP1
Cancer3DLURAP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616129   
Orphanet
MedgenLURAP1
Genetic Testing Registry LURAP1
NextProtQ96LR2 [Medical]
TSGene541468
GENETestsLURAP1
Target ValidationLURAP1
Huge Navigator LURAP1 [HugePedia]
snp3D : Map Gene to Disease541468
BioCentury BCIQLURAP1
ClinGenLURAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD541468
Chemical/Pharm GKB GenePA142672401
Clinical trialLURAP1
Miscellaneous
canSAR (ICR)LURAP1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLURAP1
EVEXLURAP1
GoPubMedLURAP1
iHOPLURAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:25:11 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.