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LUZP1 (leucine zipper protein 1)

Identity

Alias_symbol (synonym)LUZP
Other alias
HGNC (Hugo) LUZP1
LocusID (NCBI) 7798
Atlas_Id 68704
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 23410516 and ends at 23495351 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ERRFI1 (1p36.23) / LUZP1 (1p36.12)LUZP1 (1p36.12) / CDYL (6p25.1)LUZP1 (1p36.12) / GNB1 (1p36.33)
LUZP1 (1p36.12) / NEDD4L (18q21.31)LUZP1 (1p36.12) / SUGP2 (19p13.11)RPS24 (10q22.3) / LUZP1 (1p36.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUZP1   14985
Cards
Entrez_Gene (NCBI)LUZP1  7798  leucine zipper protein 1
AliasesLUZP
GeneCards (Weizmann)LUZP1
Ensembl hg19 (Hinxton)ENSG00000169641 [Gene_View]  chr1:23410516-23495351 [Contig_View]  LUZP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000169641 [Gene_View]  chr1:23410516-23495351 [Contig_View]  LUZP1 [Vega]
ICGC DataPortalENSG00000169641
TCGA cBioPortalLUZP1
AceView (NCBI)LUZP1
Genatlas (Paris)LUZP1
WikiGenes7798
SOURCE (Princeton)LUZP1
Genetics Home Reference (NIH)LUZP1
Genomic and cartography
GoldenPath hg19 (UCSC)LUZP1  -     chr1:23410516-23495351 -  1p36.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LUZP1  -     1p36.12   [Description]    (hg38-Dec_2013)
EnsemblLUZP1 - 1p36.12 [CytoView hg19]  LUZP1 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBILUZP1 [Mapview hg19]  LUZP1 [Mapview hg38]
OMIM601422   
Gene and transcription
Genbank (Entrez)AK000297 AK025345 AK074153 AK093016 AL831896
RefSeq transcript (Entrez)NM_001142546 NM_033631
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929289
Consensus coding sequences : CCDS (NCBI)LUZP1
Cluster EST : UnigeneHs.257900 [ NCBI ]
CGAP (NCI)Hs.257900
Alternative Splicing GalleryENSG00000169641
Gene ExpressionLUZP1 [ NCBI-GEO ]   LUZP1 [ EBI - ARRAY_EXPRESS ]   LUZP1 [ SEEK ]   LUZP1 [ MEM ]
Gene Expression Viewer (FireBrowse)LUZP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7798
GTEX Portal (Tissue expression)LUZP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86V48   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86V48  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86V48
Splice isoforms : SwissVarQ86V48
PhosPhoSitePlusQ86V48
Domains : Interpro (EBI)Luzp1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUZP1
DMDM Disease mutations7798
Blocks (Seattle)LUZP1
SuperfamilyQ86V48
Human Protein AtlasENSG00000169641
Peptide AtlasQ86V48
HPRD03250
IPIIPI00296830   IPI00395737   IPI00744623   IPI01010449   IPI00981064   
Protein Interaction databases
DIP (DOE-UCLA)Q86V48
IntAct (EBI)Q86V48
FunCoupENSG00000169641
BioGRIDLUZP1
STRING (EMBL)LUZP1
ZODIACLUZP1
Ontologies - Pathways
QuickGOQ86V48
Ontology : AmiGOventricular septum development  nucleus  membrane  neural fold bending  artery development  extracellular exosome  
Ontology : EGO-EBIventricular septum development  nucleus  membrane  neural fold bending  artery development  extracellular exosome  
NDEx NetworkLUZP1
Atlas of Cancer Signalling NetworkLUZP1
Wikipedia pathwaysLUZP1
Orthology - Evolution
OrthoDB7798
GeneTree (enSembl)ENSG00000169641
Phylogenetic Trees/Animal Genes : TreeFamLUZP1
HOVERGENQ86V48
HOGENOMQ86V48
Homologs : HomoloGeneLUZP1
Homology/Alignments : Family Browser (UCSC)LUZP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLUZP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LUZP1
dbVarLUZP1
ClinVarLUZP1
1000_GenomesLUZP1 
Exome Variant ServerLUZP1
ExAC (Exome Aggregation Consortium)LUZP1 (select the gene name)
Genetic variants : HAPMAP7798
Genomic Variants (DGV)LUZP1 [DGVbeta]
DECIPHER (Syndromes)1:23410516-23495351  ENSG00000169641
CONAN: Copy Number AnalysisLUZP1 
Mutations
ICGC Data PortalLUZP1 
TCGA Data PortalLUZP1 
Broad Tumor PortalLUZP1
OASIS PortalLUZP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLUZP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLUZP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LUZP1
DgiDB (Drug Gene Interaction Database)LUZP1
DoCM (Curated mutations)LUZP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LUZP1 (select a term)
intoGenLUZP1
Cancer3DLUZP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601422   
Orphanet
MedgenLUZP1
Genetic Testing Registry LUZP1
NextProtQ86V48 [Medical]
TSGene7798
GENETestsLUZP1
Huge Navigator LUZP1 [HugePedia]
snp3D : Map Gene to Disease7798
BioCentury BCIQLUZP1
ClinGenLUZP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7798
Chemical/Pharm GKB GenePA30487
Clinical trialLUZP1
Miscellaneous
canSAR (ICR)LUZP1 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUZP1
EVEXLUZP1
GoPubMedLUZP1
iHOPLUZP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:22 CET 2017

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