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LUZP2 (leucine zipper protein 2)

Identity

Other aliasKFSP2566
PRO6246
HGNC (Hugo) LUZP2
LocusID (NCBI) 338645
Atlas_Id 68705
Location 11p14.3  [Link to chromosome band 11p14]
Location_base_pair Starts at 24496970 and ends at 25082640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CELF1 (11p11.2) / LUZP2 (11p14.3)LUZP2 (11p14.3) / ABCB7 (Xq13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUZP2   23206
Cards
Entrez_Gene (NCBI)LUZP2  338645  leucine zipper protein 2
AliasesKFSP2566; PRO6246
GeneCards (Weizmann)LUZP2
Ensembl hg19 (Hinxton)ENSG00000187398 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187398 [Gene_View]  chr11:24496970-25082640 [Contig_View]  LUZP2 [Vega]
ICGC DataPortalENSG00000187398
TCGA cBioPortalLUZP2
AceView (NCBI)LUZP2
Genatlas (Paris)LUZP2
WikiGenes338645
SOURCE (Princeton)LUZP2
Genetics Home Reference (NIH)LUZP2
Genomic and cartography
GoldenPath hg38 (UCSC)LUZP2  -     chr11:24496970-25082640 +  11p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LUZP2  -     11p14.3   [Description]    (hg19-Feb_2009)
EnsemblLUZP2 - 11p14.3 [CytoView hg19]  LUZP2 - 11p14.3 [CytoView hg38]
Mapping of homologs : NCBILUZP2 [Mapview hg19]  LUZP2 [Mapview hg38]
OMIM608178   
Gene and transcription
Genbank (Entrez)AK126974 AK127695 AK309077 AL832641 AY164460
RefSeq transcript (Entrez)NM_001009909 NM_001252008 NM_001252010
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LUZP2
Cluster EST : UnigeneHs.655032 [ NCBI ]
CGAP (NCI)Hs.655032
Alternative Splicing GalleryENSG00000187398
Gene ExpressionLUZP2 [ NCBI-GEO ]   LUZP2 [ EBI - ARRAY_EXPRESS ]   LUZP2 [ SEEK ]   LUZP2 [ MEM ]
Gene Expression Viewer (FireBrowse)LUZP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338645
GTEX Portal (Tissue expression)LUZP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TE4
Splice isoforms : SwissVarQ86TE4
PhosPhoSitePlusQ86TE4
Domains : Interpro (EBI)Luzp2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUZP2
DMDM Disease mutations338645
Blocks (Seattle)LUZP2
SuperfamilyQ86TE4
Human Protein AtlasENSG00000187398
Peptide AtlasQ86TE4
HPRD17348
IPIIPI00748890   IPI00384089   IPI00985379   IPI00879972   
Protein Interaction databases
DIP (DOE-UCLA)Q86TE4
IntAct (EBI)Q86TE4
FunCoupENSG00000187398
BioGRIDLUZP2
STRING (EMBL)LUZP2
ZODIACLUZP2
Ontologies - Pathways
QuickGOQ86TE4
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkLUZP2
Atlas of Cancer Signalling NetworkLUZP2
Wikipedia pathwaysLUZP2
Orthology - Evolution
OrthoDB338645
GeneTree (enSembl)ENSG00000187398
Phylogenetic Trees/Animal Genes : TreeFamLUZP2
HOVERGENQ86TE4
HOGENOMQ86TE4
Homologs : HomoloGeneLUZP2
Homology/Alignments : Family Browser (UCSC)LUZP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLUZP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LUZP2
dbVarLUZP2
ClinVarLUZP2
1000_GenomesLUZP2 
Exome Variant ServerLUZP2
ExAC (Exome Aggregation Consortium)LUZP2 (select the gene name)
Genetic variants : HAPMAP338645
Genomic Variants (DGV)LUZP2 [DGVbeta]
DECIPHERLUZP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLUZP2 
Mutations
ICGC Data PortalLUZP2 
TCGA Data PortalLUZP2 
Broad Tumor PortalLUZP2
OASIS PortalLUZP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLUZP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLUZP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch LUZP2
DgiDB (Drug Gene Interaction Database)LUZP2
DoCM (Curated mutations)LUZP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LUZP2 (select a term)
intoGenLUZP2
Cancer3DLUZP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608178   
Orphanet
MedgenLUZP2
Genetic Testing Registry LUZP2
NextProtQ86TE4 [Medical]
TSGene338645
GENETestsLUZP2
Target ValidationLUZP2
Huge Navigator LUZP2 [HugePedia]
snp3D : Map Gene to Disease338645
BioCentury BCIQLUZP2
ClinGenLUZP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338645
Chemical/Pharm GKB GenePA134956714
Clinical trialLUZP2
Miscellaneous
canSAR (ICR)LUZP2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUZP2
EVEXLUZP2
GoPubMedLUZP2
iHOPLUZP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:26:42 CEST 2017

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