Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LUZP4 (leucine zipper protein 4)

Identity

Alias_symbol (synonym)HOM-TES-85
CT-8
CT28
Other aliasCT-28
HGNC (Hugo) LUZP4
LocusID (NCBI) 51213
Atlas_Id 40844
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 115289717 and ends at 115307556 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUZP4   24971
Cards
Entrez_Gene (NCBI)LUZP4  51213  leucine zipper protein 4
AliasesCT-28; CT-8; CT28; HOM-TES-85
GeneCards (Weizmann)LUZP4
Ensembl hg19 (Hinxton)ENSG00000102021 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102021 [Gene_View]  chrX:115289717-115307556 [Contig_View]  LUZP4 [Vega]
ICGC DataPortalENSG00000102021
TCGA cBioPortalLUZP4
AceView (NCBI)LUZP4
Genatlas (Paris)LUZP4
WikiGenes51213
SOURCE (Princeton)LUZP4
Genetics Home Reference (NIH)LUZP4
Genomic and cartography
GoldenPath hg38 (UCSC)LUZP4  -     chrX:115289717-115307556 +  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LUZP4  -     Xq23   [Description]    (hg19-Feb_2009)
EnsemblLUZP4 - Xq23 [CytoView hg19]  LUZP4 - Xq23 [CytoView hg38]
Mapping of homologs : NCBILUZP4 [Mapview hg19]  LUZP4 [Mapview hg38]
OMIM300616   
Gene and transcription
Genbank (Entrez)AF124430 AK093369 AK314765 AW118228 BC128134
RefSeq transcript (Entrez)NM_001318840 NM_016383
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LUZP4
Cluster EST : UnigeneHs.242183 [ NCBI ]
CGAP (NCI)Hs.242183
Alternative Splicing GalleryENSG00000102021
Gene ExpressionLUZP4 [ NCBI-GEO ]   LUZP4 [ EBI - ARRAY_EXPRESS ]   LUZP4 [ SEEK ]   LUZP4 [ MEM ]
Gene Expression Viewer (FireBrowse)LUZP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51213
GTEX Portal (Tissue expression)LUZP4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P127   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P127  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P127
Splice isoforms : SwissVarQ9P127
PhosPhoSitePlusQ9P127
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUZP4
DMDM Disease mutations51213
Blocks (Seattle)LUZP4
SuperfamilyQ9P127
Human Protein AtlasENSG00000102021
Peptide AtlasQ9P127
HPRD06589
IPIIPI00008980   IPI00902467   IPI01018668   
Protein Interaction databases
DIP (DOE-UCLA)Q9P127
IntAct (EBI)Q9P127
FunCoupENSG00000102021
BioGRIDLUZP4
STRING (EMBL)LUZP4
ZODIACLUZP4
Ontologies - Pathways
QuickGOQ9P127
Ontology : AmiGOsingle-stranded DNA binding  RNA binding  single-stranded RNA binding  protein binding  nucleus  cytoplasm  mRNA export from nucleus  cell growth  
Ontology : EGO-EBIsingle-stranded DNA binding  RNA binding  single-stranded RNA binding  protein binding  nucleus  cytoplasm  mRNA export from nucleus  cell growth  
NDEx NetworkLUZP4
Atlas of Cancer Signalling NetworkLUZP4
Wikipedia pathwaysLUZP4
Orthology - Evolution
OrthoDB51213
GeneTree (enSembl)ENSG00000102021
Phylogenetic Trees/Animal Genes : TreeFamLUZP4
HOVERGENQ9P127
HOGENOMQ9P127
Homologs : HomoloGeneLUZP4
Homology/Alignments : Family Browser (UCSC)LUZP4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLUZP4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LUZP4
dbVarLUZP4
ClinVarLUZP4
1000_GenomesLUZP4 
Exome Variant ServerLUZP4
ExAC (Exome Aggregation Consortium)LUZP4 (select the gene name)
Genetic variants : HAPMAP51213
Genomic Variants (DGV)LUZP4 [DGVbeta]
DECIPHERLUZP4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLUZP4 
Mutations
ICGC Data PortalLUZP4 
TCGA Data PortalLUZP4 
Broad Tumor PortalLUZP4
OASIS PortalLUZP4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLUZP4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLUZP4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch LUZP4
DgiDB (Drug Gene Interaction Database)LUZP4
DoCM (Curated mutations)LUZP4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LUZP4 (select a term)
intoGenLUZP4
Cancer3DLUZP4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300616   
Orphanet
MedgenLUZP4
Genetic Testing Registry LUZP4
NextProtQ9P127 [Medical]
TSGene51213
GENETestsLUZP4
Target ValidationLUZP4
Huge Navigator LUZP4 [HugePedia]
snp3D : Map Gene to Disease51213
BioCentury BCIQLUZP4
ClinGenLUZP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51213
Chemical/Pharm GKB GenePA134920076
Clinical trialLUZP4
Miscellaneous
canSAR (ICR)LUZP4 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUZP4
EVEXLUZP4
GoPubMedLUZP4
iHOPLUZP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:41:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.