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LUZP4 (leucine zipper protein 4)

Identity

Alias (NCBI)CT-28
CT-8
CT28
HOM-TES-85
HGNC (Hugo) LUZP4
HGNC Alias symbHOM-TES-85
CT-8
CT28
HGNC Alias namecancer/testis antigen 28
LocusID (NCBI) 51213
Atlas_Id 40844
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 115289715 and ends at 115307563 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LUZP4   24971
Cards
Entrez_Gene (NCBI)LUZP4    leucine zipper protein 4
AliasesCT-28; CT-8; CT28; HOM-TES-85
GeneCards (Weizmann)LUZP4
Ensembl hg19 (Hinxton)ENSG00000102021 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102021 [Gene_View]  ENSG00000102021 [Sequence]  chrX:115289715-115307563 [Contig_View]  LUZP4 [Vega]
ICGC DataPortalENSG00000102021
TCGA cBioPortalLUZP4
AceView (NCBI)LUZP4
Genatlas (Paris)LUZP4
SOURCE (Princeton)LUZP4
Genetics Home Reference (NIH)LUZP4
Genomic and cartography
GoldenPath hg38 (UCSC)LUZP4  -     chrX:115289715-115307563 +  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LUZP4  -     Xq23   [Description]    (hg19-Feb_2009)
GoldenPathLUZP4 - Xq23 [CytoView hg19]  LUZP4 - Xq23 [CytoView hg38]
ImmunoBaseENSG00000102021
genome Data Viewer NCBILUZP4 [Mapview hg19]  
OMIM300616   
Gene and transcription
Genbank (Entrez)AF124430 AK093369 AK314765 AW118228 BC128134
RefSeq transcript (Entrez)NM_001318840 NM_016383
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LUZP4
Alternative Splicing GalleryENSG00000102021
Gene ExpressionLUZP4 [ NCBI-GEO ]   LUZP4 [ EBI - ARRAY_EXPRESS ]   LUZP4 [ SEEK ]   LUZP4 [ MEM ]
Gene Expression Viewer (FireBrowse)LUZP4 [ Firebrowse - Broad ]
GenevisibleExpression of LUZP4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51213
GTEX Portal (Tissue expression)LUZP4
Human Protein AtlasENSG00000102021-LUZP4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P127   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P127  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P127
Splice isoforms : SwissVarQ9P127
PhosPhoSitePlusQ9P127
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUZP4
Blocks (Seattle)LUZP4
SuperfamilyQ9P127
Human Protein Atlas [tissue]ENSG00000102021-LUZP4 [tissue]
Peptide AtlasQ9P127
HPRD06589
IPIIPI00008980   IPI00902467   IPI01018668   
Protein Interaction databases
DIP (DOE-UCLA)Q9P127
IntAct (EBI)Q9P127
BioGRIDLUZP4
STRING (EMBL)LUZP4
ZODIACLUZP4
Ontologies - Pathways
QuickGOQ9P127
Ontology : AmiGORNA binding  protein binding  nucleus  cytoplasm  mRNA transport  
Ontology : EGO-EBIRNA binding  protein binding  nucleus  cytoplasm  mRNA transport  
NDEx NetworkLUZP4
Atlas of Cancer Signalling NetworkLUZP4
Wikipedia pathwaysLUZP4
Orthology - Evolution
OrthoDB51213
GeneTree (enSembl)ENSG00000102021
Phylogenetic Trees/Animal Genes : TreeFamLUZP4
HOGENOMQ9P127
Homologs : HomoloGeneLUZP4
Homology/Alignments : Family Browser (UCSC)LUZP4
Gene fusions - Rearrangements
Fusion : QuiverLUZP4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLUZP4 [hg38]
dbVarLUZP4
ClinVarLUZP4
MonarchLUZP4
1000_GenomesLUZP4 
Exome Variant ServerLUZP4
GNOMAD BrowserENSG00000102021
Varsome BrowserLUZP4
Genomic Variants (DGV)LUZP4 [DGVbeta]
DECIPHERLUZP4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLUZP4 
Mutations
ICGC Data PortalLUZP4 
TCGA Data PortalLUZP4 
Broad Tumor PortalLUZP4
OASIS PortalLUZP4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLUZP4  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DLUZP4
Mutations and Diseases : HGMDLUZP4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch LUZP4
DgiDB (Drug Gene Interaction Database)LUZP4
DoCM (Curated mutations)LUZP4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LUZP4 (select a term)
intoGenLUZP4
Cancer3DLUZP4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300616   
Orphanet
DisGeNETLUZP4
MedgenLUZP4
Genetic Testing Registry LUZP4
NextProtQ9P127 [Medical]
GENETestsLUZP4
Target ValidationLUZP4
Huge Navigator LUZP4 [HugePedia]
ClinGenLUZP4
Clinical trials, drugs, therapy
MyCancerGenomeLUZP4
Protein Interactions : CTD
Pharm GKB GenePA134920076
PharosQ9P127
Clinical trialLUZP4
Miscellaneous
canSAR (ICR)LUZP4 (select the gene name)
HarmonizomeLUZP4
DataMed IndexLUZP4
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLUZP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jan 1 18:23:33 CET 2021

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