Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LUZP6 (leucine zipper protein 6)

Identity

Alias_symbol (synonym)MTPNUT
MPD6
Other alias
HGNC (Hugo) LUZP6
LocusID (NCBI) 767558
Atlas_Id 50164
Location 7q33  [Link to chromosome band 7q33]
Location_base_pair Starts at 135926755 and ends at 135977456 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LUZP6   33955
Cards
Entrez_Gene (NCBI)LUZP6  767558  leucine zipper protein 6
AliasesMPD6; MTPNUT
GeneCards (Weizmann)LUZP6
Ensembl hg19 (Hinxton)ENSG00000267697 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267697 [Gene_View]  chr7:135926755-135977456 [Contig_View]  LUZP6 [Vega]
ICGC DataPortalENSG00000267697
TCGA cBioPortalLUZP6
AceView (NCBI)LUZP6
Genatlas (Paris)LUZP6
WikiGenes767558
SOURCE (Princeton)LUZP6
Genetics Home Reference (NIH)LUZP6
Genomic and cartography
GoldenPath hg38 (UCSC)LUZP6  -     chr7:135926755-135977456 -  7q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LUZP6  -     7q33   [Description]    (hg19-Feb_2009)
EnsemblLUZP6 - 7q33 [CytoView hg19]  LUZP6 - 7q33 [CytoView hg38]
Mapping of homologs : NCBILUZP6 [Mapview hg19]  LUZP6 [Mapview hg38]
OMIM611050   
Gene and transcription
Genbank (Entrez)AA742560 AF106075 AK055660 AK056225 AK309816
RefSeq transcript (Entrez)NM_001128619
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LUZP6
Cluster EST : UnigeneHs.602015 [ NCBI ]
CGAP (NCI)Hs.602015
Alternative Splicing GalleryENSG00000267697
Gene ExpressionLUZP6 [ NCBI-GEO ]   LUZP6 [ EBI - ARRAY_EXPRESS ]   LUZP6 [ SEEK ]   LUZP6 [ MEM ]
Gene Expression Viewer (FireBrowse)LUZP6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)767558
GTEX Portal (Tissue expression)LUZP6
Human Protein AtlasENSG00000267697-LUZP6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ538Z0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ538Z0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ538Z0
Splice isoforms : SwissVarQ538Z0
PhosPhoSitePlusQ538Z0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LUZP6
DMDM Disease mutations767558
Blocks (Seattle)LUZP6
SuperfamilyQ538Z0
Human Protein Atlas [tissue]ENSG00000267697-LUZP6 [tissue]
Peptide AtlasQ538Z0
IPIIPI00884965   
Protein Interaction databases
DIP (DOE-UCLA)Q538Z0
IntAct (EBI)Q538Z0
FunCoupENSG00000267697
BioGRIDLUZP6
STRING (EMBL)LUZP6
ZODIACLUZP6
Ontologies - Pathways
QuickGOQ538Z0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLUZP6
Atlas of Cancer Signalling NetworkLUZP6
Wikipedia pathwaysLUZP6
Orthology - Evolution
OrthoDB767558
GeneTree (enSembl)ENSG00000267697
Phylogenetic Trees/Animal Genes : TreeFamLUZP6
HOVERGENQ538Z0
HOGENOMQ538Z0
Homologs : HomoloGeneLUZP6
Homology/Alignments : Family Browser (UCSC)LUZP6
Gene fusions - Rearrangements
Fusion: Tumor Portal LUZP6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLUZP6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LUZP6
dbVarLUZP6
ClinVarLUZP6
1000_GenomesLUZP6 
Exome Variant ServerLUZP6
ExAC (Exome Aggregation Consortium)ENSG00000267697
GNOMAD BrowserENSG00000267697
Genetic variants : HAPMAP767558
Genomic Variants (DGV)LUZP6 [DGVbeta]
DECIPHERLUZP6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLUZP6 
Mutations
ICGC Data PortalLUZP6 
TCGA Data PortalLUZP6 
Broad Tumor PortalLUZP6
OASIS PortalLUZP6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLUZP6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLUZP6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LUZP6
DgiDB (Drug Gene Interaction Database)LUZP6
DoCM (Curated mutations)LUZP6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LUZP6 (select a term)
intoGenLUZP6
Cancer3DLUZP6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611050   
Orphanet
MedgenLUZP6
Genetic Testing Registry LUZP6
NextProtQ538Z0 [Medical]
TSGene767558
GENETestsLUZP6
Target ValidationLUZP6
Huge Navigator LUZP6 [HugePedia]
snp3D : Map Gene to Disease767558
BioCentury BCIQLUZP6
ClinGenLUZP6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD767558
Chemical/Pharm GKB GenePA162394695
Clinical trialLUZP6
Miscellaneous
canSAR (ICR)LUZP6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLUZP6
EVEXLUZP6
GoPubMedLUZP6
iHOPLUZP6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:57:33 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.