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LVCAT8 (liver cancer-associated transcript 8)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105377586
Atlas_Id 55278
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 185539770 and ends at 185546026 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LVCAT8  105377586  liver cancer-associated transcript 8
Aliases
GeneCards (Weizmann)LVCAT8
Ensembl hg19 (Hinxton) [Gene_View]  chr4:185539770-185546026 [Contig_View]  LVCAT8 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:185539770-185546026 [Contig_View]  LVCAT8 [Vega]
TCGA cBioPortalLVCAT8
AceView (NCBI)LVCAT8
Genatlas (Paris)LVCAT8
WikiGenes105377586
SOURCE (Princeton)LVCAT8
Genetics Home Reference (NIH)LVCAT8
Genomic and cartography
GoldenPath hg19 (UCSC)LVCAT8  -     chr4:185539770-185546026 -  4q35.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LVCAT8  -     4q35.1   [Description]    (hg38-Dec_2013)
EnsemblLVCAT8 - 4q35.1 [CytoView hg19]  LVCAT8 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBILVCAT8 [Mapview hg19]  LVCAT8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX445795 CB047685 CB047686 HG497595 HG497596
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)LVCAT8
Cluster EST : UnigeneHs.338354 [ NCBI ]
CGAP (NCI)Hs.338354
Gene ExpressionLVCAT8 [ NCBI-GEO ]   LVCAT8 [ EBI - ARRAY_EXPRESS ]   LVCAT8 [ SEEK ]   LVCAT8 [ MEM ]
Gene Expression Viewer (FireBrowse)LVCAT8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377586
GTEX Portal (Tissue expression)LVCAT8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LVCAT8
DMDM Disease mutations105377586
Blocks (Seattle)LVCAT8
Protein Interaction databases
BioGRIDLVCAT8
STRING (EMBL)LVCAT8
ZODIACLVCAT8
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105377586
BioCentury BCIQLVCAT8
ClinGenLVCAT8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377586
Clinical trialLVCAT8
Miscellaneous
canSAR (ICR)LVCAT8 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLVCAT8
EVEXLVCAT8
GoPubMedLVCAT8
iHOPLVCAT8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:13:59 CET 2017

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