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LY6E-DT (LY6E divergent transcript)

Identity

Alias_symbol (synonym)LOC100133669
Other alias-
HGNC (Hugo) LY6E-DT
LocusID (NCBI) 100133669
Atlas_Id 78998
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 142982031 and ends at 143018390 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LY6E-DT   53728
Cards
Entrez_Gene (NCBI)LY6E-DT  100133669  LY6E divergent transcript
Aliases
GeneCards (Weizmann)LY6E-DT
Ensembl hg19 (Hinxton)ENSG00000247317 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247317 [Gene_View]  chr8:142982031-143018390 [Contig_View]  LY6E-DT [Vega]
ICGC DataPortalENSG00000247317
TCGA cBioPortalLY6E-DT
AceView (NCBI)LY6E-DT
Genatlas (Paris)LY6E-DT
WikiGenes100133669
SOURCE (Princeton)LY6E-DT
Genetics Home Reference (NIH)LY6E-DT
Genomic and cartography
GoldenPath hg38 (UCSC)LY6E-DT  -     chr8:142982031-143018390 -  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LY6E-DT  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblLY6E-DT - 8q24.3 [CytoView hg19]  LY6E-DT - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBILY6E-DT [Mapview hg19]  LY6E-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC007589 BM557790
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187573
Consensus coding sequences : CCDS (NCBI)LY6E-DT
Cluster EST : UnigeneHs.735710 [ NCBI ]
CGAP (NCI)Hs.735710
Alternative Splicing GalleryENSG00000247317
Gene ExpressionLY6E-DT [ NCBI-GEO ]   LY6E-DT [ EBI - ARRAY_EXPRESS ]   LY6E-DT [ SEEK ]   LY6E-DT [ MEM ]
Gene Expression Viewer (FireBrowse)LY6E-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100133669
GTEX Portal (Tissue expression)LY6E-DT
Human Protein AtlasENSG00000247317-LY6E-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain familyes :(P&am (NCBI)
Conserved Domain (NCBI)LY6E-DT
DMDM Disease mutations100133669
Blocks (Seattle)LY6E-DT
Human Protein Atlas [tissue]ENSG00000247317-LY6E-DT [tissue]
Protein Interaction databases
FunCoupENSG00000247317
BioGRIDLY6E-DT
STRING (EMBL)LY6E-DT
ZODIACLY6E-DT
Ontologies - Pathways
Huge Navigator LY6E-DT [HugePedia]
snp3D : Map Gene to Disease100133669
BioCentury BCIQLY6E-DT
ClinGenLY6E-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100133669
Clinical trialLY6E-DT
Miscellaneous
canSAR (ICR)LY6E-DT (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLY6E-DT
EVEXLY6E-DT
GoPubMedLY6E-DT
iHOPLY6E-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:28 CET 2017

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