Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LY6G6E (lymphocyte antigen 6 family member G6E)

Identity

Alias_namesC6orf22
chromosome 6 open reading frame 22
lymphocyte antigen 6 complex, locus G6E (pseudogene)
Alias_symbol (synonym)G6e
Other alias
HGNC (Hugo) LY6G6E
LocusID (NCBI) 79136
Atlas_Id 50167
Location 6_GL000256v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 3011632 and ends at 3013108 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LY6G6E   13934
Cards
Entrez_Gene (NCBI)LY6G6E  79136  lymphocyte antigen 6 family member G6E
AliasesC6orf22; G6e
GeneCards (Weizmann)LY6G6E
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6_GL000256v2_alt:3011632-3013108 [Contig_View]  LY6G6E [Vega]
TCGA cBioPortalLY6G6E
AceView (NCBI)LY6G6E
Genatlas (Paris)LY6G6E
WikiGenes79136
SOURCE (Princeton)LY6G6E
Genetics Home Reference (NIH)LY6G6E
Genomic and cartography
GoldenPath hg38 (UCSC)LY6G6E  -     chr6_GL000256v2_alt:3011632-3013108 -  6_GL000256v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LY6G6E  -     6_GL000256v2_alt   [Description]    (hg19-Feb_2009)
EnsemblLY6G6E - 6_GL000256v2_alt [CytoView hg19]  LY6G6E - 6_GL000256v2_alt [CytoView hg38]
Mapping of homologs : NCBILY6G6E [Mapview hg19]  LY6G6E [Mapview hg38]
OMIM610437   
Gene and transcription
Genbank (Entrez)AJ245419 AJ315538 AJ315539 BC069141 DA786728
RefSeq transcript (Entrez)NM_001003721 NM_024123
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LY6G6E
Cluster EST : UnigeneHs.247883 [ NCBI ]
CGAP (NCI)Hs.247883
Gene ExpressionLY6G6E [ NCBI-GEO ]   LY6G6E [ EBI - ARRAY_EXPRESS ]   LY6G6E [ SEEK ]   LY6G6E [ MEM ]
Gene Expression Viewer (FireBrowse)LY6G6E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)79136
GTEX Portal (Tissue expression)LY6G6E
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LY6G6E
DMDM Disease mutations79136
Blocks (Seattle)LY6G6E
HPRD14330
IPIIPI00848068   IPI00646884   IPI00916094   IPI00937260   
Protein Interaction databases
BioGRIDLY6G6E
STRING (EMBL)LY6G6E
ZODIACLY6G6E
Ontologies - Pathways
Huge Navigator LY6G6E [HugePedia]
snp3D : Map Gene to Disease79136
BioCentury BCIQLY6G6E
ClinGenLY6G6E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79136
Chemical/Pharm GKB GenePA37828
Clinical trialLY6G6E
Miscellaneous
canSAR (ICR)LY6G6E (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLY6G6E
EVEXLY6G6E
GoPubMedLY6G6E
iHOPLY6G6E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:16:43 CEST 2017

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