Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LY6G6F-LY6G6D (LY6G6F-LY6G6D readthrough)

Identity

Alias (NCBI)G6F-LY6G6D
MEGT-1
MEGT1
HGNC (Hugo) LY6G6F-LY6G6D
LocusID (NCBI) 110599563
Atlas_Id 79340
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31706869 and ends at 31717837 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LY6G6F-LY6G6D   38821
Cards
Entrez_Gene (NCBI)LY6G6F-LY6G6D    LY6G6F-LY6G6D readthrough
AliasesG6F-LY6G6D; MEGT-1; MEGT1
GeneCards (Weizmann)LY6G6F-LY6G6D
Ensembl hg19 (Hinxton)ENSG00000250641 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250641 [Gene_View]  ENSG00000250641 [Sequence]  chr6:31706869-31717837 [Contig_View]  LY6G6F-LY6G6D [Vega]
ICGC DataPortalENSG00000250641
TCGA cBioPortalLY6G6F-LY6G6D
AceView (NCBI)LY6G6F-LY6G6D
Genatlas (Paris)LY6G6F-LY6G6D
SOURCE (Princeton)LY6G6F-LY6G6D
Genetics Home Reference (NIH)LY6G6F-LY6G6D
Genomic and cartography
GoldenPath hg38 (UCSC)LY6G6F-LY6G6D  -     chr6:31706869-31717837 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LY6G6F-LY6G6D  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathLY6G6F-LY6G6D - 6p21.33 [CytoView hg19]  LY6G6F-LY6G6D - 6p21.33 [CytoView hg38]
ImmunoBaseENSG00000250641
genome Data Viewer NCBILY6G6F-LY6G6D [Mapview hg19]  
Gene and transcription
Genbank (Entrez)KU253636 KU253637
RefSeq transcript (Entrez)NM_001353334
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LY6G6F-LY6G6D
Alternative Splicing GalleryENSG00000250641
Gene ExpressionLY6G6F-LY6G6D [ NCBI-GEO ]   LY6G6F-LY6G6D [ EBI - ARRAY_EXPRESS ]   LY6G6F-LY6G6D [ SEEK ]   LY6G6F-LY6G6D [ MEM ]
Gene Expression Viewer (FireBrowse)LY6G6F-LY6G6D [ Firebrowse - Broad ]
GenevisibleExpression of LY6G6F-LY6G6D in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)110599563
GTEX Portal (Tissue expression)LY6G6F-LY6G6D
Human Protein AtlasENSG00000250641-LY6G6F-LY6G6D [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LY6G6F-LY6G6D
Blocks (Seattle)LY6G6F-LY6G6D
Human Protein Atlas [tissue]ENSG00000250641-LY6G6F-LY6G6D [tissue]
Protein Interaction databases
BioGRIDLY6G6F-LY6G6D
STRING (EMBL)LY6G6F-LY6G6D
ZODIACLY6G6F-LY6G6D
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLY6G6F-LY6G6D
EVEXLY6G6F-LY6G6D
GoPubMedLY6G6F-LY6G6D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:12:28 CET 2020

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