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LYPLAL1-DT (LYPLAL1 divergent transcript)

Identity

Other aliasLYPLAL1-AS1
HGNC (Hugo) LYPLAL1-DT
LocusID (NCBI) 643723
Atlas_Id 80308
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 219080973 and ends at 219173788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LYPLAL1-DT   50560
Cards
Entrez_Gene (NCBI)LYPLAL1-DT  643723  LYPLAL1 divergent transcript
AliasesLYPLAL1-AS1
GeneCards (Weizmann)LYPLAL1-DT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:219080973-219173788 [Contig_View]  LYPLAL1-DT [Vega]
TCGA cBioPortalLYPLAL1-DT
AceView (NCBI)LYPLAL1-DT
Genatlas (Paris)LYPLAL1-DT
WikiGenes643723
SOURCE (Princeton)LYPLAL1-DT
Genetics Home Reference (NIH)LYPLAL1-DT
Genomic and cartography
GoldenPath hg38 (UCSC)LYPLAL1-DT  -     chr1:219080973-219173788 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LYPLAL1-DT  -     1q41   [Description]    (hg19-Feb_2009)
GoldenPathLYPLAL1-DT - 1q41 [CytoView hg19]  LYPLAL1-DT - 1q41 [CytoView hg38]
Mapping of homologs : NCBILYPLAL1-DT [Mapview hg19]  LYPLAL1-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC086863 DA132981
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LYPLAL1-DT
Cluster EST : UnigeneHs.519774 [ NCBI ]
CGAP (NCI)Hs.519774
Gene ExpressionLYPLAL1-DT [ NCBI-GEO ]   LYPLAL1-DT [ EBI - ARRAY_EXPRESS ]   LYPLAL1-DT [ SEEK ]   LYPLAL1-DT [ MEM ]
Gene Expression Viewer (FireBrowse)LYPLAL1-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643723
GTEX Portal (Tissue expression)LYPLAL1-DT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LYPLAL1-DT
DMDM Disease mutations643723
Blocks (Seattle)LYPLAL1-DT
Protein Interaction databases
BioGRIDLYPLAL1-DT
STRING (EMBL)LYPLAL1-DT
ZODIACLYPLAL1-DT
Ontologies - Pathways
Huge Navigator LYPLAL1-DT [HugePedia]
snp3D : Map Gene to Disease643723
BioCentury BCIQLYPLAL1-DT
ClinGenLYPLAL1-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643723
Clinical trialLYPLAL1-DT
Miscellaneous
canSAR (ICR)LYPLAL1-DT (select the gene name)
DataMed IndexLYPLAL1-DT
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLYPLAL1-DT
EVEXLYPLAL1-DT
GoPubMedLYPLAL1-DT
iHOPLYPLAL1-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 7 17:35:37 CEST 2019

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