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LZIC (leucine zipper and CTNNBIP1 domain containing)

Identity

Alias_symbol (synonym)MGC15436
Other alias-
HGNC (Hugo) LZIC
LocusID (NCBI) 84328
Atlas_Id 68741
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 9926298 and ends at 9943427 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LZIC   17497
Cards
Entrez_Gene (NCBI)LZIC  84328  leucine zipper and CTNNBIP1 domain containing
Aliases
GeneCards (Weizmann)LZIC
Ensembl hg19 (Hinxton)ENSG00000162441 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162441 [Gene_View]  chr1:9926298-9943427 [Contig_View]  LZIC [Vega]
ICGC DataPortalENSG00000162441
TCGA cBioPortalLZIC
AceView (NCBI)LZIC
Genatlas (Paris)LZIC
WikiGenes84328
SOURCE (Princeton)LZIC
Genetics Home Reference (NIH)LZIC
Genomic and cartography
GoldenPath hg38 (UCSC)LZIC  -     chr1:9926298-9943427 -  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LZIC  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblLZIC - 1p36.22 [CytoView hg19]  LZIC - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBILZIC [Mapview hg19]  LZIC [Mapview hg38]
OMIM610458   
Gene and transcription
Genbank (Entrez)AA220235 AB060688 AK025913 AK304348 AK312550
RefSeq transcript (Entrez)NM_001316973 NM_001316974 NM_001316975 NM_001316976 NM_032368
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LZIC
Cluster EST : UnigeneHs.733062 [ NCBI ]
CGAP (NCI)Hs.733062
Alternative Splicing GalleryENSG00000162441
Gene ExpressionLZIC [ NCBI-GEO ]   LZIC [ EBI - ARRAY_EXPRESS ]   LZIC [ SEEK ]   LZIC [ MEM ]
Gene Expression Viewer (FireBrowse)LZIC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84328
GTEX Portal (Tissue expression)LZIC
Human Protein AtlasENSG00000162441-LZIC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZA0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZA0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZA0
Splice isoforms : SwissVarQ8WZA0
PhosPhoSitePlusQ8WZA0
Domains : Interpro (EBI)ICAT   
Domain families : Pfam (Sanger)ICAT (PF06384)   
Domain families : Pfam (NCBI)pfam06384   
Conserved Domain (NCBI)LZIC
DMDM Disease mutations84328
Blocks (Seattle)LZIC
SuperfamilyQ8WZA0
Human Protein Atlas [tissue]ENSG00000162441-LZIC [tissue]
Peptide AtlasQ8WZA0
HPRD14340
IPIIPI01011745   IPI00152900   
Protein Interaction databases
DIP (DOE-UCLA)Q8WZA0
IntAct (EBI)Q8WZA0
FunCoupENSG00000162441
BioGRIDLZIC
STRING (EMBL)LZIC
ZODIACLZIC
Ontologies - Pathways
QuickGOQ8WZA0
Ontology : AmiGObeta-catenin binding  response to ionizing radiation  
Ontology : EGO-EBIbeta-catenin binding  response to ionizing radiation  
NDEx NetworkLZIC
Atlas of Cancer Signalling NetworkLZIC
Wikipedia pathwaysLZIC
Orthology - Evolution
OrthoDB84328
GeneTree (enSembl)ENSG00000162441
Phylogenetic Trees/Animal Genes : TreeFamLZIC
HOVERGENQ8WZA0
HOGENOMQ8WZA0
Homologs : HomoloGeneLZIC
Homology/Alignments : Family Browser (UCSC)LZIC
Gene fusions - Rearrangements
Tumor Fusion PortalLZIC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLZIC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LZIC
dbVarLZIC
ClinVarLZIC
1000_GenomesLZIC 
Exome Variant ServerLZIC
ExAC (Exome Aggregation Consortium)ENSG00000162441
GNOMAD BrowserENSG00000162441
Genetic variants : HAPMAP84328
Genomic Variants (DGV)LZIC [DGVbeta]
DECIPHERLZIC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLZIC 
Mutations
ICGC Data PortalLZIC 
TCGA Data PortalLZIC 
Broad Tumor PortalLZIC
OASIS PortalLZIC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLZIC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLZIC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LZIC
DgiDB (Drug Gene Interaction Database)LZIC
DoCM (Curated mutations)LZIC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LZIC (select a term)
intoGenLZIC
Cancer3DLZIC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610458   
Orphanet
DisGeNETLZIC
MedgenLZIC
Genetic Testing Registry LZIC
NextProtQ8WZA0 [Medical]
TSGene84328
GENETestsLZIC
Target ValidationLZIC
Huge Navigator LZIC [HugePedia]
snp3D : Map Gene to Disease84328
BioCentury BCIQLZIC
ClinGenLZIC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84328
Chemical/Pharm GKB GenePA30504
Clinical trialLZIC
Miscellaneous
canSAR (ICR)LZIC (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLZIC
EVEXLZIC
GoPubMedLZIC
iHOPLZIC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:55:42 CET 2017

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