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MAB21L1 (mab-21 like 1)

Identity

Alias_namesmab-21 (C. elegans)-like 1
mab-21-like 1 (C. elegans)
Alias_symbol (synonym)CAGR1
Other aliasNbla00126
HGNC (Hugo) MAB21L1
LocusID (NCBI) 4081
Atlas_Id 56023
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 36047926 and ends at 36050832 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAB21L1   6757
Cards
Entrez_Gene (NCBI)MAB21L1  4081  mab-21 like 1
AliasesCAGR1; Nbla00126
GeneCards (Weizmann)MAB21L1
Ensembl hg19 (Hinxton)ENSG00000180660 [Gene_View]  chr13:36047926-36050832 [Contig_View]  MAB21L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000180660 [Gene_View]  chr13:36047926-36050832 [Contig_View]  MAB21L1 [Vega]
ICGC DataPortalENSG00000180660
TCGA cBioPortalMAB21L1
AceView (NCBI)MAB21L1
Genatlas (Paris)MAB21L1
WikiGenes4081
SOURCE (Princeton)MAB21L1
Genetics Home Reference (NIH)MAB21L1
Genomic and cartography
GoldenPath hg19 (UCSC)MAB21L1  -     chr13:36047926-36050832 -  13q13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAB21L1  -     13q13.3   [Description]    (hg38-Dec_2013)
EnsemblMAB21L1 - 13q13.3 [CytoView hg19]  MAB21L1 - 13q13.3 [CytoView hg38]
Mapping of homologs : NCBIMAB21L1 [Mapview hg19]  MAB21L1 [Mapview hg38]
OMIM601280   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_005584
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAB21L1
Cluster EST : UnigeneHs.584776 [ NCBI ]
CGAP (NCI)Hs.584776
Alternative Splicing GalleryENSG00000180660
Gene ExpressionMAB21L1 [ NCBI-GEO ]   MAB21L1 [ EBI - ARRAY_EXPRESS ]   MAB21L1 [ SEEK ]   MAB21L1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAB21L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4081
GTEX Portal (Tissue expression)MAB21L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13394   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13394  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13394
Splice isoforms : SwissVarQ13394
PhosPhoSitePlusQ13394
Domains : Interpro (EBI)Mab-21-like_1/2    Mab-21_dom   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)MAB21L1
DMDM Disease mutations4081
Blocks (Seattle)MAB21L1
SuperfamilyQ13394
Human Protein AtlasENSG00000180660
Peptide AtlasQ13394
HPRD03178
IPIIPI00023724   
Protein Interaction databases
DIP (DOE-UCLA)Q13394
IntAct (EBI)Q13394
FunCoupENSG00000180660
BioGRIDMAB21L1
STRING (EMBL)MAB21L1
ZODIACMAB21L1
Ontologies - Pathways
QuickGOQ13394
Ontology : AmiGOnucleus  positive regulation of cell proliferation  anatomical structure morphogenesis  camera-type eye development  
Ontology : EGO-EBInucleus  positive regulation of cell proliferation  anatomical structure morphogenesis  camera-type eye development  
NDEx NetworkMAB21L1
Atlas of Cancer Signalling NetworkMAB21L1
Wikipedia pathwaysMAB21L1
Orthology - Evolution
OrthoDB4081
GeneTree (enSembl)ENSG00000180660
Phylogenetic Trees/Animal Genes : TreeFamMAB21L1
HOVERGENQ13394
HOGENOMQ13394
Homologs : HomoloGeneMAB21L1
Homology/Alignments : Family Browser (UCSC)MAB21L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAB21L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAB21L1
dbVarMAB21L1
ClinVarMAB21L1
1000_GenomesMAB21L1 
Exome Variant ServerMAB21L1
ExAC (Exome Aggregation Consortium)MAB21L1 (select the gene name)
Genetic variants : HAPMAP4081
Genomic Variants (DGV)MAB21L1 [DGVbeta]
DECIPHER (Syndromes)13:36047926-36050832  ENSG00000180660
CONAN: Copy Number AnalysisMAB21L1 
Mutations
ICGC Data PortalMAB21L1 
TCGA Data PortalMAB21L1 
Broad Tumor PortalMAB21L1
OASIS PortalMAB21L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAB21L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAB21L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAB21L1
DgiDB (Drug Gene Interaction Database)MAB21L1
DoCM (Curated mutations)MAB21L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAB21L1 (select a term)
intoGenMAB21L1
Cancer3DMAB21L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601280   
Orphanet
MedgenMAB21L1
Genetic Testing Registry MAB21L1
NextProtQ13394 [Medical]
TSGene4081
GENETestsMAB21L1
Huge Navigator MAB21L1 [HugePedia]
snp3D : Map Gene to Disease4081
BioCentury BCIQMAB21L1
ClinGenMAB21L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4081
Chemical/Pharm GKB GenePA30516
Clinical trialMAB21L1
Miscellaneous
canSAR (ICR)MAB21L1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAB21L1
EVEXMAB21L1
GoPubMedMAB21L1
iHOPMAB21L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:08:10 CEST 2017

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