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MAB21L2 (mab-21 like 2)

Identity

Alias_namesmab-21 (C. elegans)-like 2
mab-21-like 2 (C. elegans)
Other aliasMCOPS14
HGNC (Hugo) MAB21L2
LocusID (NCBI) 10586
Atlas_Id 41225
Location 4q31.3  [Link to chromosome band 4q31]
Location_base_pair Starts at 150581925 and ends at 150584693 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAB21L2   6758
Cards
Entrez_Gene (NCBI)MAB21L2  10586  mab-21 like 2
AliasesMCOPS14
GeneCards (Weizmann)MAB21L2
Ensembl hg19 (Hinxton)ENSG00000181541 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181541 [Gene_View]  chr4:150581925-150584693 [Contig_View]  MAB21L2 [Vega]
ICGC DataPortalENSG00000181541
TCGA cBioPortalMAB21L2
AceView (NCBI)MAB21L2
Genatlas (Paris)MAB21L2
WikiGenes10586
SOURCE (Princeton)MAB21L2
Genetics Home Reference (NIH)MAB21L2
Genomic and cartography
GoldenPath hg38 (UCSC)MAB21L2  -     chr4:150581925-150584693 +  4q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAB21L2  -     4q31.3   [Description]    (hg19-Feb_2009)
EnsemblMAB21L2 - 4q31.3 [CytoView hg19]  MAB21L2 - 4q31.3 [CytoView hg38]
Mapping of homologs : NCBIMAB21L2 [Mapview hg19]  MAB21L2 [Mapview hg38]
OMIM604357   615877   
Gene and transcription
Genbank (Entrez)AF262032 AF370007 AK055665 BC009983 HQ448192
RefSeq transcript (Entrez)NM_006439
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAB21L2
Cluster EST : UnigeneHs.584852 [ NCBI ]
CGAP (NCI)Hs.584852
Alternative Splicing GalleryENSG00000181541
Gene ExpressionMAB21L2 [ NCBI-GEO ]   MAB21L2 [ EBI - ARRAY_EXPRESS ]   MAB21L2 [ SEEK ]   MAB21L2 [ MEM ]
Gene Expression Viewer (FireBrowse)MAB21L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10586
GTEX Portal (Tissue expression)MAB21L2
Human Protein AtlasENSG00000181541-MAB21L2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y586   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y586  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y586
Splice isoforms : SwissVarQ9Y586
PhosPhoSitePlusQ9Y586
Domains : Interpro (EBI)Mab-21-like_1/2    Mab-21_dom    Ricin_B_lectin   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)MAB21L2
DMDM Disease mutations10586
Blocks (Seattle)MAB21L2
SuperfamilyQ9Y586
Human Protein Atlas [tissue]ENSG00000181541-MAB21L2 [tissue]
Peptide AtlasQ9Y586
HPRD05075
IPIIPI00387034   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y586
IntAct (EBI)Q9Y586
FunCoupENSG00000181541
BioGRIDMAB21L2
STRING (EMBL)MAB21L2
ZODIACMAB21L2
Ontologies - Pathways
QuickGOQ9Y586
Ontology : AmiGOeye development  protein binding  nucleus  nervous system development  positive regulation of cell proliferation  embryonic body morphogenesis  camera-type eye development  
Ontology : EGO-EBIeye development  protein binding  nucleus  nervous system development  positive regulation of cell proliferation  embryonic body morphogenesis  camera-type eye development  
NDEx NetworkMAB21L2
Atlas of Cancer Signalling NetworkMAB21L2
Wikipedia pathwaysMAB21L2
Orthology - Evolution
OrthoDB10586
GeneTree (enSembl)ENSG00000181541
Phylogenetic Trees/Animal Genes : TreeFamMAB21L2
HOVERGENQ9Y586
HOGENOMQ9Y586
Homologs : HomoloGeneMAB21L2
Homology/Alignments : Family Browser (UCSC)MAB21L2
Gene fusions - Rearrangements
Tumor Fusion PortalMAB21L2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAB21L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAB21L2
dbVarMAB21L2
ClinVarMAB21L2
1000_GenomesMAB21L2 
Exome Variant ServerMAB21L2
ExAC (Exome Aggregation Consortium)ENSG00000181541
GNOMAD BrowserENSG00000181541
Genetic variants : HAPMAP10586
Genomic Variants (DGV)MAB21L2 [DGVbeta]
DECIPHERMAB21L2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAB21L2 
Mutations
ICGC Data PortalMAB21L2 
TCGA Data PortalMAB21L2 
Broad Tumor PortalMAB21L2
OASIS PortalMAB21L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAB21L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAB21L2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAB21L2
DgiDB (Drug Gene Interaction Database)MAB21L2
DoCM (Curated mutations)MAB21L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAB21L2 (select a term)
intoGenMAB21L2
Cancer3DMAB21L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604357    615877   
Orphanet23196   
DisGeNETMAB21L2
MedgenMAB21L2
Genetic Testing Registry MAB21L2
NextProtQ9Y586 [Medical]
TSGene10586
GENETestsMAB21L2
Target ValidationMAB21L2
Huge Navigator MAB21L2 [HugePedia]
snp3D : Map Gene to Disease10586
BioCentury BCIQMAB21L2
ClinGenMAB21L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10586
Chemical/Pharm GKB GenePA30517
Clinical trialMAB21L2
Miscellaneous
canSAR (ICR)MAB21L2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAB21L2
EVEXMAB21L2
GoPubMedMAB21L2
iHOPMAB21L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:21:13 CET 2017

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