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MAB21L3 (mab-21-like 3 (C. elegans))

Identity

Alias_namesC1orf161
chromosome 1 open reading frame 161
mab-21-like 3 (C. elegans)
Alias_symbol (synonym)FLJ38716
Other alias
HGNC (Hugo) MAB21L3
LocusID (NCBI) 126868
Atlas_Id 68747
Location 1p13.1  [Link to chromosome band 1p13]
Location_base_pair Starts at 116654376 and ends at 116677861 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAB21L3   26787
Cards
Entrez_Gene (NCBI)MAB21L3  126868  mab-21-like 3 (C. elegans)
AliasesC1orf161
GeneCards (Weizmann)MAB21L3
Ensembl hg19 (Hinxton)ENSG00000173212 [Gene_View]  chr1:116654376-116677861 [Contig_View]  MAB21L3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000173212 [Gene_View]  chr1:116654376-116677861 [Contig_View]  MAB21L3 [Vega]
ICGC DataPortalENSG00000173212
TCGA cBioPortalMAB21L3
AceView (NCBI)MAB21L3
Genatlas (Paris)MAB21L3
WikiGenes126868
SOURCE (Princeton)MAB21L3
Genetics Home Reference (NIH)MAB21L3
Genomic and cartography
GoldenPath hg19 (UCSC)MAB21L3  -     chr1:116654376-116677861 +  1p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAB21L3  -     1p13.1   [Description]    (hg38-Dec_2013)
EnsemblMAB21L3 - 1p13.1 [CytoView hg19]  MAB21L3 - 1p13.1 [CytoView hg38]
Mapping of homologs : NCBIMAB21L3 [Mapview hg19]  MAB21L3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096035 BC128148 BC128149
RefSeq transcript (Entrez)NM_152367
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)MAB21L3
Cluster EST : UnigeneHs.376194 [ NCBI ]
CGAP (NCI)Hs.376194
Alternative Splicing GalleryENSG00000173212
Gene ExpressionMAB21L3 [ NCBI-GEO ]   MAB21L3 [ EBI - ARRAY_EXPRESS ]   MAB21L3 [ SEEK ]   MAB21L3 [ MEM ]
Gene Expression Viewer (FireBrowse)MAB21L3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126868
GTEX Portal (Tissue expression)MAB21L3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8X9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8X9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8X9
Splice isoforms : SwissVarQ8N8X9
PhosPhoSitePlusQ8N8X9
Domains : Interpro (EBI)Mab-21-rel    Mab-21_dom   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Conserved Domain (NCBI)MAB21L3
DMDM Disease mutations126868
Blocks (Seattle)MAB21L3
SuperfamilyQ8N8X9
Human Protein AtlasENSG00000173212
Peptide AtlasQ8N8X9
HPRD08245
IPIIPI00167636   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8X9
IntAct (EBI)Q8N8X9
FunCoupENSG00000173212
BioGRIDMAB21L3
STRING (EMBL)MAB21L3
ZODIACMAB21L3
Ontologies - Pathways
QuickGOQ8N8X9
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkMAB21L3
Atlas of Cancer Signalling NetworkMAB21L3
Wikipedia pathwaysMAB21L3
Orthology - Evolution
OrthoDB126868
GeneTree (enSembl)ENSG00000173212
Phylogenetic Trees/Animal Genes : TreeFamMAB21L3
HOVERGENQ8N8X9
HOGENOMQ8N8X9
Homologs : HomoloGeneMAB21L3
Homology/Alignments : Family Browser (UCSC)MAB21L3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAB21L3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAB21L3
dbVarMAB21L3
ClinVarMAB21L3
1000_GenomesMAB21L3 
Exome Variant ServerMAB21L3
ExAC (Exome Aggregation Consortium)MAB21L3 (select the gene name)
Genetic variants : HAPMAP126868
Genomic Variants (DGV)MAB21L3 [DGVbeta]
DECIPHER (Syndromes)1:116654376-116677861  ENSG00000173212
CONAN: Copy Number AnalysisMAB21L3 
Mutations
ICGC Data PortalMAB21L3 
TCGA Data PortalMAB21L3 
Broad Tumor PortalMAB21L3
OASIS PortalMAB21L3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAB21L3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAB21L3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAB21L3
DgiDB (Drug Gene Interaction Database)MAB21L3
DoCM (Curated mutations)MAB21L3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAB21L3 (select a term)
intoGenMAB21L3
Cancer3DMAB21L3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMAB21L3
Genetic Testing Registry MAB21L3
NextProtQ8N8X9 [Medical]
TSGene126868
GENETestsMAB21L3
Huge Navigator MAB21L3 [HugePedia]
snp3D : Map Gene to Disease126868
BioCentury BCIQMAB21L3
ClinGenMAB21L3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126868
Chemical/Pharm GKB GenePA142672412
Clinical trialMAB21L3
Miscellaneous
canSAR (ICR)MAB21L3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAB21L3
EVEXMAB21L3
GoPubMedMAB21L3
iHOPMAB21L3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:31 CET 2017

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