Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MACC1-AS1 (MACC1 antisense RNA 1)

Identity

Alias_namesMACC1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) MACC1-AS1
LocusID (NCBI) 100874041
Atlas_Id 68748
Location 7p21.1  [Link to chromosome band 7p21]
Location_base_pair Starts at 20141916 and ends at 20153531 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MACC1-AS1   41257
Cards
Entrez_Gene (NCBI)MACC1-AS1  100874041  MACC1 antisense RNA 1
Aliases
GeneCards (Weizmann)MACC1-AS1
Ensembl hg19 (Hinxton)ENSG00000228598 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228598 [Gene_View]  chr7:20141916-20153531 [Contig_View]  MACC1-AS1 [Vega]
ICGC DataPortalENSG00000228598
TCGA cBioPortalMACC1-AS1
AceView (NCBI)MACC1-AS1
Genatlas (Paris)MACC1-AS1
WikiGenes100874041
SOURCE (Princeton)MACC1-AS1
Genetics Home Reference (NIH)MACC1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MACC1-AS1  -     chr7:20141916-20153531 +  7p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MACC1-AS1  -     7p21.1   [Description]    (hg19-Feb_2009)
EnsemblMACC1-AS1 - 7p21.1 [CytoView hg19]  MACC1-AS1 - 7p21.1 [CytoView hg38]
Mapping of homologs : NCBIMACC1-AS1 [Mapview hg19]  MACC1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX114725
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MACC1-AS1
Cluster EST : UnigeneHs.145104 [ NCBI ]
CGAP (NCI)Hs.145104
Alternative Splicing GalleryENSG00000228598
Gene ExpressionMACC1-AS1 [ NCBI-GEO ]   MACC1-AS1 [ EBI - ARRAY_EXPRESS ]   MACC1-AS1 [ SEEK ]   MACC1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MACC1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874041
GTEX Portal (Tissue expression)MACC1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MACC1-AS1
DMDM Disease mutations100874041
Blocks (Seattle)MACC1-AS1
Human Protein AtlasENSG00000228598
Protein Interaction databases
FunCoupENSG00000228598
BioGRIDMACC1-AS1
STRING (EMBL)MACC1-AS1
ZODIACMACC1-AS1
Ontologies - Pathways
Huge Navigator MACC1-AS1 [HugePedia]
snp3D : Map Gene to Disease100874041
BioCentury BCIQMACC1-AS1
ClinGenMACC1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874041
Clinical trialMACC1-AS1
Miscellaneous
canSAR (ICR)MACC1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineMACC1-AS1
EVEXMACC1-AS1
GoPubMedMACC1-AS1
iHOPMACC1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:26:49 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.