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MACC1 (MACC1, MET transcriptional regulator)

Identity

Alias_namesmetastasis associated in colon cancer 1
Alias_symbol (synonym)7A5
SH3BP4L
Other alias
HGNC (Hugo) MACC1
LocusID (NCBI) 346389
Atlas_Id 50459
Location 7p21.1  [Link to chromosome band 7p21]
Location_base_pair Starts at 20134656 and ends at 20217390 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MACC1   30215
Cards
Entrez_Gene (NCBI)MACC1  346389  MACC1, MET transcriptional regulator
Aliases7A5; SH3BP4L
GeneCards (Weizmann)MACC1
Ensembl hg19 (Hinxton)ENSG00000183742 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183742 [Gene_View]  chr7:20134656-20217390 [Contig_View]  MACC1 [Vega]
ICGC DataPortalENSG00000183742
TCGA cBioPortalMACC1
AceView (NCBI)MACC1
Genatlas (Paris)MACC1
WikiGenes346389
SOURCE (Princeton)MACC1
Genetics Home Reference (NIH)MACC1
Genomic and cartography
GoldenPath hg38 (UCSC)MACC1  -     chr7:20134656-20217390 -  7p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MACC1  -     7p21.1   [Description]    (hg19-Feb_2009)
EnsemblMACC1 - 7p21.1 [CytoView hg19]  MACC1 - 7p21.1 [CytoView hg38]
Mapping of homologs : NCBIMACC1 [Mapview hg19]  MACC1 [Mapview hg38]
OMIM612646   
Gene and transcription
Genbank (Entrez)AF086401 AJ313524 AK128850 AK131400 AL359055
RefSeq transcript (Entrez)NM_182762
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MACC1
Cluster EST : UnigeneHs.598388 [ NCBI ]
CGAP (NCI)Hs.598388
Alternative Splicing GalleryENSG00000183742
Gene ExpressionMACC1 [ NCBI-GEO ]   MACC1 [ EBI - ARRAY_EXPRESS ]   MACC1 [ SEEK ]   MACC1 [ MEM ]
Gene Expression Viewer (FireBrowse)MACC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)346389
GTEX Portal (Tissue expression)MACC1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN28   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN28  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN28
Splice isoforms : SwissVarQ6ZN28
PhosPhoSitePlusQ6ZN28
Domaine pattern : Prosite (Expaxy)ZU5 (PS51145)   
Domains : Interpro (EBI)ZU5_dom   
Domain families : Pfam (Sanger)ZU5 (PF00791)   
Domain families : Pfam (NCBI)pfam00791   
Conserved Domain (NCBI)MACC1
DMDM Disease mutations346389
Blocks (Seattle)MACC1
SuperfamilyQ6ZN28
Human Protein AtlasENSG00000183742
Peptide AtlasQ6ZN28
HPRD12381
IPIIPI00376087   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN28
IntAct (EBI)Q6ZN28
FunCoupENSG00000183742
BioGRIDMACC1
STRING (EMBL)MACC1
ZODIACMACC1
Ontologies - Pathways
QuickGOQ6ZN28
Ontology : AmiGOnucleus  cytoplasm  mitochondrion  transcription, DNA-templated  regulation of transcription, DNA-templated  growth factor activity  positive regulation of cell division  
Ontology : EGO-EBInucleus  cytoplasm  mitochondrion  transcription, DNA-templated  regulation of transcription, DNA-templated  growth factor activity  positive regulation of cell division  
NDEx NetworkMACC1
Atlas of Cancer Signalling NetworkMACC1
Wikipedia pathwaysMACC1
Orthology - Evolution
OrthoDB346389
GeneTree (enSembl)ENSG00000183742
Phylogenetic Trees/Animal Genes : TreeFamMACC1
HOVERGENQ6ZN28
HOGENOMQ6ZN28
Homologs : HomoloGeneMACC1
Homology/Alignments : Family Browser (UCSC)MACC1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMACC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MACC1
dbVarMACC1
ClinVarMACC1
1000_GenomesMACC1 
Exome Variant ServerMACC1
ExAC (Exome Aggregation Consortium)MACC1 (select the gene name)
Genetic variants : HAPMAP346389
Genomic Variants (DGV)MACC1 [DGVbeta]
DECIPHERMACC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMACC1 
Mutations
ICGC Data PortalMACC1 
TCGA Data PortalMACC1 
Broad Tumor PortalMACC1
OASIS PortalMACC1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMACC1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMACC1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MACC1
DgiDB (Drug Gene Interaction Database)MACC1
DoCM (Curated mutations)MACC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MACC1 (select a term)
intoGenMACC1
Cancer3DMACC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612646   
Orphanet
MedgenMACC1
Genetic Testing Registry MACC1
NextProtQ6ZN28 [Medical]
TSGene346389
GENETestsMACC1
Target ValidationMACC1
Huge Navigator MACC1 [HugePedia]
snp3D : Map Gene to Disease346389
BioCentury BCIQMACC1
ClinGenMACC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD346389
Chemical/Pharm GKB GenePA164722150
Clinical trialMACC1
Miscellaneous
canSAR (ICR)MACC1 (select the gene name)
Probes
Litterature
PubMed83 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMACC1
EVEXMACC1
GoPubMedMACC1
iHOPMACC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:16:48 CEST 2017

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