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MACF1 (microtubule actin crosslinking factor 1)

Identity

Alias (NCBI)ABP620
ACF7
LIS9
Lnc-PMIF
MACF
OFC4
HGNC (Hugo) MACF1
HGNC Alias symbKIAA0465
ACF7
ABP620
KIAA1251
MACF
FLJ45612
FLJ46776
Lnc-PMIF
HGNC Alias nameactin cross-linking factor
 620 kDa actin binding protein
 macrophin 1
 trabeculin-alpha
 actin cross-linking family protein 7
 postulated migration inhibitory factor
LocusID (NCBI) 23499
Atlas_Id 54438
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 39084167 and ends at 39487138 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADCYAP1R1 (7p14.3) / MACF1 (1p34.3)BRAF (7q34) / MACF1 (1p34.3)CAP1 (1p34.2) / MACF1 (1p34.3)
CLU (8p21.1) / MACF1 (1p34.3)MACF1 (1p34.3) / AKIRIN1 (1p34.3)MACF1 (1p34.3) / B4GALT2 (1p34.1)
MACF1 (1p34.3) / BRAF (7q34)MACF1 (1p34.3) / C1D (2p14)MACF1 (1p34.3) / CLASP1 (2q14.2)
MACF1 (1p34.3) / DHX58 (17q21.2)MACF1 (1p34.3) / FAF1 (1p32.3)MACF1 (1p34.3) / GRIK3 (1p34.3)
MACF1 (1p34.3) / LOC728558 ()MACF1 (1p34.3) / MARC2 (1q41)MACF1 (1p34.3) / PATJ (1p31.3)
MACF1 (1p34.3) / PHF14 (7p21.3)MACF1 (1p34.3) / PTPRU (1p35.3)MACF1 (1p34.3) / RLF (1p34.2)
MACF1 (1p34.3) / RPS27A (2p16.1)MACF1 (1p34.3) / SERPINA5 (14q32.13)MBD2 (18q21.2) / MACF1 (1p34.3)
PKHD1L1 (8q23.1) / MACF1 (1p34.3)RLF (1p34.2) / MACF1 (1p34.3)SLC30A7 (1p21.2) / MACF1 (1p34.3)
SSR3 (3q25.31) / MACF1 (1p34.3)TNKS1BP1 (11q12.1) / MACF1 (1p34.3)BRAF 7q34 / MACF1 1p34.3
MACF1 1p34.3 / AKIRIN1 1p34.3MACF1 1p34.3 / BRAF 7q34MACF1 1p34.3 / FAF1 1p32.3
MACF1 1p34.3 / GRIK3 1p34.3MACF1 1p34.3 / INADL 1p31.3MACF1 1p34.3 / PTPRU 1p35.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MACF1   13664
Cards
Entrez_Gene (NCBI)MACF1    microtubule actin crosslinking factor 1
AliasesABP620; ACF7; LIS9; Lnc-PMIF; 
MACF; OFC4
GeneCards (Weizmann)MACF1
Ensembl hg19 (Hinxton)ENSG00000127603 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127603 [Gene_View]  ENSG00000127603 [Sequence]  chr1:39084167-39487138 [Contig_View]  MACF1 [Vega]
ICGC DataPortalENSG00000127603
TCGA cBioPortalMACF1
AceView (NCBI)MACF1
Genatlas (Paris)MACF1
SOURCE (Princeton)MACF1
Genetics Home Reference (NIH)MACF1
Genomic and cartography
GoldenPath hg38 (UCSC)MACF1  -     chr1:39084167-39487138 +  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MACF1  -     1p34.3   [Description]    (hg19-Feb_2009)
GoldenPathMACF1 - 1p34.3 [CytoView hg19]  MACF1 - 1p34.3 [CytoView hg38]
ImmunoBaseENSG00000127603
Genome Data Viewer NCBIMACF1 [Mapview hg19]  
OMIM608271   618325   
Gene and transcription
Genbank (Entrez)AB007934 AB029290 AB033077 AF317696 AI400583
RefSeq transcript (Entrez)NM_001394062 NM_012090 NM_033044
Consensus coding sequences : CCDS (NCBI)MACF1
Gene ExpressionMACF1 [ NCBI-GEO ]   MACF1 [ EBI - ARRAY_EXPRESS ]   MACF1 [ SEEK ]   MACF1 [ MEM ]
Gene Expression Viewer (FireBrowse)MACF1 [ Firebrowse - Broad ]
GenevisibleExpression of MACF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23499
GTEX Portal (Tissue expression)MACF1
Human Protein AtlasENSG00000127603-MACF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MACF1
Human Protein Atlas [tissue]ENSG00000127603-MACF1 [tissue]
HPRD09750
Protein Interaction databases
BioGRIDMACF1
STRING (EMBL)MACF1
ZODIACMACF1
Ontologies - Pathways
Litterature
PubMed102 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMACF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:17:23 CEST 2021

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