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MACO1 (macoilin 1)

Identity

Alias (NCBI)MACOILIN
TMEM57
HGNC (Hugo) MACO1
LocusID (NCBI) 55219
Atlas_Id 80616
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25430897 and ends at 25500207 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)MACO1   25572
Cards
Entrez_Gene (NCBI)MACO1    macoilin 1
AliasesMACOILIN; TMEM57
GeneCards (Weizmann)MACO1
Ensembl hg19 (Hinxton)ENSG00000204178 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204178 [Gene_View]  ENSG00000204178 [Sequence]  chr1:25430897-25500207 [Contig_View]  MACO1 [Vega]
ICGC DataPortalENSG00000204178
TCGA cBioPortalMACO1
AceView (NCBI)MACO1
Genatlas (Paris)MACO1
SOURCE (Princeton)MACO1
Genetics Home Reference (NIH)MACO1
Genomic and cartography
GoldenPath hg38 (UCSC)MACO1  -     chr1:25430897-25500207 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MACO1  -     1p36.11   [Description]    (hg19-Feb_2009)
GoldenPathMACO1 - 1p36.11 [CytoView hg19]  MACO1 - 1p36.11 [CytoView hg38]
ImmunoBaseENSG00000204178
Genome Data Viewer NCBIMACO1 [Mapview hg19]  
OMIM610301   
Gene and transcription
Genbank (Entrez)AA827805 AK001609 AK311472 AY845015 AY845035
RefSeq transcript (Entrez)NM_001282564 NM_018202
Consensus coding sequences : CCDS (NCBI)MACO1
Gene ExpressionMACO1 [ NCBI-GEO ]   MACO1 [ EBI - ARRAY_EXPRESS ]   MACO1 [ SEEK ]   MACO1 [ MEM ]
Gene Expression Viewer (FireBrowse)MACO1 [ Firebrowse - Broad ]
GenevisibleExpression of MACO1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55219
GTEX Portal (Tissue expression)MACO1
Human Protein AtlasENSG00000204178-MACO1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5G2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5G2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5G2
PhosPhoSitePlusQ8N5G2
Domains : Interpro (EBI)Macoilin   
Domain families : Pfam (Sanger)Macoilin (PF09726)   
Domain families : Pfam (NCBI)pfam09726   
Conserved Domain (NCBI)MACO1
SuperfamilyQ8N5G2
AlphaFold pdb e-kbQ8N5G2   
Human Protein Atlas [tissue]ENSG00000204178-MACO1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8N5G2
IntAct (EBI)Q8N5G2
BioGRIDMACO1
STRING (EMBL)MACO1
ZODIACMACO1
Ontologies - Pathways
QuickGOQ8N5G2
Ontology : AmiGOmolecular_function  protein binding  nucleus  chemotaxis  brain development  microtubule binding  integral component of membrane  neuronal signal transduction  neuronal signal transduction  axon  rough endoplasmic reticulum membrane  rough endoplasmic reticulum membrane  nuclear membrane  nuclear membrane  neuron projection terminus  synapse  actin filament binding  
Ontology : EGO-EBImolecular_function  protein binding  nucleus  chemotaxis  brain development  microtubule binding  integral component of membrane  neuronal signal transduction  neuronal signal transduction  axon  rough endoplasmic reticulum membrane  rough endoplasmic reticulum membrane  nuclear membrane  nuclear membrane  neuron projection terminus  synapse  actin filament binding  
NDEx NetworkMACO1
Atlas of Cancer Signalling NetworkMACO1
Wikipedia pathwaysMACO1
Orthology - Evolution
OrthoDB55219
GeneTree (enSembl)ENSG00000204178
Phylogenetic Trees/Animal Genes : TreeFamMACO1
Homologs : HomoloGeneMACO1
Homology/Alignments : Family Browser (UCSC)MACO1
Gene fusions - Rearrangements
Fusion : QuiverMACO1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMACO1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MACO1
dbVarMACO1
ClinVarMACO1
MonarchMACO1
1000_GenomesMACO1 
Exome Variant ServerMACO1
GNOMAD BrowserENSG00000204178
Varsome BrowserMACO1
ACMGMACO1 variants
VarityQ8N5G2
Genomic Variants (DGV)MACO1 [DGVbeta]
DECIPHERMACO1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMACO1 
Mutations
ICGC Data PortalMACO1 
TCGA Data PortalMACO1 
Broad Tumor PortalMACO1
OASIS PortalMACO1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMACO1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMACO1
Mutations and Diseases : HGMDMACO1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMACO1
DgiDB (Drug Gene Interaction Database)MACO1
DoCM (Curated mutations)MACO1
CIViC (Clinical Interpretations of Variants in Cancer)MACO1
Cancer3DMACO1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610301   
Orphanet
DisGeNETMACO1
MedgenMACO1
Genetic Testing Registry MACO1
NextProtQ8N5G2 [Medical]
GENETestsMACO1
Target ValidationMACO1
Huge Navigator MACO1 [HugePedia]
ClinGenMACO1
Clinical trials, drugs, therapy
MyCancerGenomeMACO1
Protein Interactions : CTDMACO1
Pharm GKB GenePA142670773
PharosQ8N5G2
Clinical trialMACO1
Miscellaneous
canSAR (ICR)MACO1
HarmonizomeMACO1
DataMed IndexMACO1
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMACO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:06:42 CEST 2021

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