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MAD1L1 (MAD1 mitotic arrest deficient-like 1 (yeast))

Identity

Other namesMAD1
PIG9
TP53I9
TXBP181
HGNC (Hugo) MAD1L1
LocusID (NCBI) 8379
Location 7p22.3
Location_base_pair Starts at 1855428 and ends at 2272583 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MAD1L1   6762
Cards
Entrez_Gene (NCBI)MAD1L1  8379  MAD1 mitotic arrest deficient-like 1 (yeast)
GeneCards (Weizmann)MAD1L1
Ensembl (Hinxton)ENSG00000002822 [Gene_View]  chr7:1855428-2272583 [Contig_View]  MAD1L1 [Vega]
AceView (NCBI)MAD1L1
Genatlas (Paris)MAD1L1
WikiGenes8379
SOURCE (Princeton)NM_001013836 NM_001013837 NM_003550
Genomic and cartography
GoldenPath (UCSC)MAD1L1  -  7p22.3   chr7:1855428-2272583 -  7p22.3   [Description]    (hg19-Feb_2009)
EnsemblMAD1L1 - 7p22.3 [CytoView]
Mapping of homologs : NCBIMAD1L1 [Mapview]
OMIM176807   602686   
Gene and transcription
Genbank (Entrez)AF083811 AF123318 AK090959 AK310481 AK310831
RefSeq transcript (Entrez)NM_001013836 NM_001013837 NM_003550
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NG_011518 NT_007819 NT_079592 NW_001838998 NW_004929329
Consensus coding sequences : CCDS (NCBI)MAD1L1
Cluster EST : UnigeneHs.654838 [ NCBI ]
CGAP (NCI)Hs.654838
Alternative Splicing : Fast-db (Paris)GSHG0027959
Alternative Splicing GalleryENSG00000002822
Gene ExpressionMAD1L1 [ NCBI-GEO ]     MAD1L1 [ SEEK ]   MAD1L1 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y6D9 (Uniprot)
NextProtQ9Y6D9  [Medical]
With graphics : InterProQ9Y6D9
Splice isoforms : SwissVarQ9Y6D9 (Swissvar)
Domains : Interpro (EBI)Mad1   
Related proteins : CluSTrQ9Y6D9
Domain families : Pfam (Sanger)MAD (PF05557)   
Domain families : Pfam (NCBI)pfam05557   
DMDM Disease mutations8379
Blocks (Seattle)Q9Y6D9
PDB (SRS)1GO4    4DZO   
PDB (PDBSum)1GO4    4DZO   
PDB (IMB)1GO4    4DZO   
PDB (RSDB)1GO4    4DZO   
Human Protein AtlasENSG00000002822
Peptide AtlasQ9Y6D9
HPRD04065
IPIIPI00940535   IPI00873518   IPI00892910   IPI00894166   IPI00893885   IPI00894035   IPI00893747   IPI00893354   IPI00893466   IPI00893181   IPI00892791   IPI00892514   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y6D9
IntAct (EBI)Q9Y6D9
FunCoupENSG00000002822
BioGRIDMAD1L1
InParanoidQ9Y6D9
Interologous Interaction database Q9Y6D9
IntegromeDBMAD1L1
STRING (EMBL)MAD1L1
Ontologies - Pathways
Ontology : AmiGOmitotic metaphase  mitotic anaphase  mitotic telophase  mitotic cell cycle  kinetochore  kinetochore  condensed chromosome kinetochore  protein binding  nucleus  nuclear pore  cytoplasm  mitochondrion  centrosome  spindle  cytosol  mitosis  mitotic cell cycle checkpoint  mitotic spindle assembly checkpoint  actin cytoskeleton  cell division  mitotic spindle  regulation of metaphase plate congression  
Ontology : EGO-EBImitotic metaphase  mitotic anaphase  mitotic telophase  mitotic cell cycle  kinetochore  kinetochore  condensed chromosome kinetochore  protein binding  nucleus  nuclear pore  cytoplasm  mitochondrion  centrosome  spindle  cytosol  mitosis  mitotic cell cycle checkpoint  mitotic spindle assembly checkpoint  actin cytoskeleton  cell division  mitotic spindle  regulation of metaphase plate congression  
Pathways : KEGGCell cycle    Progesterone-mediated oocyte maturation    Viral carcinogenesis   
REACTOMEMAD1L1
Protein Interaction DatabaseMAD1L1
Wikipedia pathwaysMAD1L1
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MAD1L1
SNP (GeneSNP Utah)MAD1L1
SNP : HGBaseMAD1L1
Genetic variants : HAPMAPMAD1L1
1000_GenomesMAD1L1 
ICGC programENSG00000002822 
Somatic Mutations in Cancer : COSMICMAD1L1 
CONAN: Copy Number AnalysisMAD1L1 
Mutations and Diseases : HGMDMAD1L1
OMIM176807    602686   
GENETestsMAD1L1
Disease Genetic AssociationMAD1L1
Huge Navigator MAD1L1 [HugePedia]  MAD1L1 [HugeCancerGEM]
Genomic VariantsMAD1L1  MAD1L1 [DGVbeta]
Exome VariantMAD1L1
dbVarMAD1L1
ClinVarMAD1L1
snp3D : Map Gene to Disease8379
General knowledge
Homologs : HomoloGeneMAD1L1
Homology/Alignments : Family Browser (UCSC)MAD1L1
Phylogenetic Trees/Animal Genes : TreeFamMAD1L1
Chemical/Protein Interactions : CTD8379
Chemical/Pharm GKB GenePA372
Clinical trialMAD1L1
Cancer Resource (Charite)ENSG00000002822
Other databases
Probes
Litterature
PubMed83 Pubmed reference(s) in Entrez
CoreMineMAD1L1
iHOPMAD1L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 16:44:13 CEST 2014

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