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MAF1 (MAF1 homolog, negative regulator of RNA polymerase III)

Identity

Alias_namesMAF1 homolog (S. cerevisiae)
Alias_symbol (synonym)DKFZp586G1123
Other alias-
HGNC (Hugo) MAF1
LocusID (NCBI) 84232
Atlas_Id 55576
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144104402 and ends at 144107612 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MAF1 (8q24.3) / CSNK1D (17q25.3)MAF1 (8q24.3) / SURF4 (9q34.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAF1   24966
Cards
Entrez_Gene (NCBI)MAF1  84232  MAF1 homolog, negative regulator of RNA polymerase III
Aliases
GeneCards (Weizmann)MAF1
Ensembl hg19 (Hinxton)ENSG00000179632 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179632 [Gene_View]  chr8:144104402-144107612 [Contig_View]  MAF1 [Vega]
ICGC DataPortalENSG00000179632
TCGA cBioPortalMAF1
AceView (NCBI)MAF1
Genatlas (Paris)MAF1
WikiGenes84232
SOURCE (Princeton)MAF1
Genetics Home Reference (NIH)MAF1
Genomic and cartography
GoldenPath hg38 (UCSC)MAF1  -     chr8:144104402-144107612 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAF1  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblMAF1 - 8q24.3 [CytoView hg19]  MAF1 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIMAF1 [Mapview hg19]  MAF1 [Mapview hg38]
OMIM610210   
Gene and transcription
Genbank (Entrez)AL136937 BC014082 BC018714 BC031273 BE093055
RefSeq transcript (Entrez)NM_032272
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAF1
Cluster EST : UnigeneHs.19673 [ NCBI ]
CGAP (NCI)Hs.19673
Alternative Splicing GalleryENSG00000179632
Gene ExpressionMAF1 [ NCBI-GEO ]   MAF1 [ EBI - ARRAY_EXPRESS ]   MAF1 [ SEEK ]   MAF1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84232
GTEX Portal (Tissue expression)MAF1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H063   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H063  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H063
Splice isoforms : SwissVarQ9H063
PhosPhoSitePlusQ9H063
Domains : Interpro (EBI)Maf1   
Domain families : Pfam (Sanger)Maf1 (PF09174)   
Domain families : Pfam (NCBI)pfam09174   
Conserved Domain (NCBI)MAF1
DMDM Disease mutations84232
Blocks (Seattle)MAF1
PDB (SRS)3NR5   
PDB (PDBSum)3NR5   
PDB (IMB)3NR5   
PDB (RSDB)3NR5   
Structural Biology KnowledgeBase3NR5   
SCOP (Structural Classification of Proteins)3NR5   
CATH (Classification of proteins structures)3NR5   
SuperfamilyQ9H063
Human Protein AtlasENSG00000179632
Peptide AtlasQ9H063
HPRD14345
IPIIPI00031063   IPI01012969   IPI00981991   IPI00979293   IPI00978681   
Protein Interaction databases
DIP (DOE-UCLA)Q9H063
IntAct (EBI)Q9H063
FunCoupENSG00000179632
BioGRIDMAF1
STRING (EMBL)MAF1
ZODIACMAF1
Ontologies - Pathways
QuickGOQ9H063
Ontology : AmiGORNA polymerase III core binding  RNA polymerase III type 1 promoter DNA binding  RNA polymerase III type 2 promoter DNA binding  RNA polymerase III type 3 promoter DNA binding  intracellular  nucleus  nucleolus  cytoplasm  cytosol  plasma membrane  transcription, DNA-templated  negative regulation of transcription from RNA polymerase III promoter  axon  dendrite  intracellular membrane-bounded organelle  perinuclear region of cytoplasm  GABA receptor binding  inhibitory synapse  transcription factor TFIIIB complex assembly  
Ontology : EGO-EBIRNA polymerase III core binding  RNA polymerase III type 1 promoter DNA binding  RNA polymerase III type 2 promoter DNA binding  RNA polymerase III type 3 promoter DNA binding  intracellular  nucleus  nucleolus  cytoplasm  cytosol  plasma membrane  transcription, DNA-templated  negative regulation of transcription from RNA polymerase III promoter  axon  dendrite  intracellular membrane-bounded organelle  perinuclear region of cytoplasm  GABA receptor binding  inhibitory synapse  transcription factor TFIIIB complex assembly  
NDEx NetworkMAF1
Atlas of Cancer Signalling NetworkMAF1
Wikipedia pathwaysMAF1
Orthology - Evolution
OrthoDB84232
GeneTree (enSembl)ENSG00000179632
Phylogenetic Trees/Animal Genes : TreeFamMAF1
HOVERGENQ9H063
HOGENOMQ9H063
Homologs : HomoloGeneMAF1
Homology/Alignments : Family Browser (UCSC)MAF1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAF1
dbVarMAF1
ClinVarMAF1
1000_GenomesMAF1 
Exome Variant ServerMAF1
ExAC (Exome Aggregation Consortium)MAF1 (select the gene name)
Genetic variants : HAPMAP84232
Genomic Variants (DGV)MAF1 [DGVbeta]
DECIPHERMAF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAF1 
Mutations
ICGC Data PortalMAF1 
TCGA Data PortalMAF1 
Broad Tumor PortalMAF1
OASIS PortalMAF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAF1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAF1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAF1
DgiDB (Drug Gene Interaction Database)MAF1
DoCM (Curated mutations)MAF1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAF1 (select a term)
intoGenMAF1
Cancer3DMAF1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610210   
Orphanet
MedgenMAF1
Genetic Testing Registry MAF1
NextProtQ9H063 [Medical]
TSGene84232
GENETestsMAF1
Target ValidationMAF1
Huge Navigator MAF1 [HugePedia]
snp3D : Map Gene to Disease84232
BioCentury BCIQMAF1
ClinGenMAF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84232
Chemical/Pharm GKB GenePA142671489
Clinical trialMAF1
Miscellaneous
canSAR (ICR)MAF1 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAF1
EVEXMAF1
GoPubMedMAF1
iHOPMAF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:06:05 CEST 2017

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