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MAFF (MAF bZIP transcription factor F)

Identity

Alias_namesv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
Alias_symbol (synonym)hMafF
Other aliasU-MAF
HGNC (Hugo) MAFF
LocusID (NCBI) 23764
Atlas_Id 41237
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38201932 and ends at 38216510 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CELSR1 (22q13.31) / MAFF (22q13.1)IFI6 (1p36.11) / MAFF (22q13.1)VILL (3p22.2) / MAFF (22q13.1)
CELSR1 22q13.31 / MAFF 22q13.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAFF   6780
Cards
Entrez_Gene (NCBI)MAFF  23764  MAF bZIP transcription factor F
AliasesU-MAF; hMafF
GeneCards (Weizmann)MAFF
Ensembl hg19 (Hinxton)ENSG00000185022 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185022 [Gene_View]  chr22:38201932-38216510 [Contig_View]  MAFF [Vega]
ICGC DataPortalENSG00000185022
TCGA cBioPortalMAFF
AceView (NCBI)MAFF
Genatlas (Paris)MAFF
WikiGenes23764
SOURCE (Princeton)MAFF
Genetics Home Reference (NIH)MAFF
Genomic and cartography
GoldenPath hg38 (UCSC)MAFF  -     chr22:38201932-38216510 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAFF  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblMAFF - 22q13.1 [CytoView hg19]  MAFF - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBIMAFF [Mapview hg19]  MAFF [Mapview hg38]
OMIM604877   
Gene and transcription
Genbank (Entrez)AB025247 AI610651 AJ010857 AK002001 AK097953
RefSeq transcript (Entrez)NM_001161572 NM_001161573 NM_001161574 NM_012323 NM_152878
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAFF
Cluster EST : UnigeneHs.517617 [ NCBI ]
CGAP (NCI)Hs.517617
Alternative Splicing GalleryENSG00000185022
Gene ExpressionMAFF [ NCBI-GEO ]   MAFF [ EBI - ARRAY_EXPRESS ]   MAFF [ SEEK ]   MAFF [ MEM ]
Gene Expression Viewer (FireBrowse)MAFF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23764
GTEX Portal (Tissue expression)MAFF
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULX9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULX9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULX9
Splice isoforms : SwissVarQ9ULX9
PhosPhoSitePlusQ9ULX9
Domaine pattern : Prosite (Expaxy)BZIP (PS50217)   
Domains : Interpro (EBI)bZIP    bZIP_Maf    MafF    TF_DNA-bd    Transciption_factor_Maf_fam   
Domain families : Pfam (Sanger)bZIP_Maf (PF03131)   
Domain families : Pfam (NCBI)pfam03131   
Domain families : Smart (EMBL)BRLZ (SM00338)  
Conserved Domain (NCBI)MAFF
DMDM Disease mutations23764
Blocks (Seattle)MAFF
SuperfamilyQ9ULX9
Human Protein AtlasENSG00000185022
Peptide AtlasQ9ULX9
HPRD05343
IPIIPI00099497   IPI00893459   IPI00893064   
Protein Interaction databases
DIP (DOE-UCLA)Q9ULX9
IntAct (EBI)Q9ULX9
FunCoupENSG00000185022
BioGRIDMAFF
STRING (EMBL)MAFF
ZODIACMAFF
Ontologies - Pathways
QuickGOQ9ULX9
Ontology : AmiGOin utero embryonic development  transcription factor activity, sequence-specific DNA binding  nucleus  nucleoplasm  mitochondrion  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  parturition  blood coagulation  skeletal muscle cell differentiation  sequence-specific DNA binding  regulation of epidermal cell differentiation  
Ontology : EGO-EBIin utero embryonic development  transcription factor activity, sequence-specific DNA binding  nucleus  nucleoplasm  mitochondrion  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  parturition  blood coagulation  skeletal muscle cell differentiation  sequence-specific DNA binding  regulation of epidermal cell differentiation  
Pathways : BIOCARTAOxidative Stress Induced Gene Expression Via Nrf2 [Genes]   
NDEx NetworkMAFF
Atlas of Cancer Signalling NetworkMAFF
Wikipedia pathwaysMAFF
Orthology - Evolution
OrthoDB23764
GeneTree (enSembl)ENSG00000185022
Phylogenetic Trees/Animal Genes : TreeFamMAFF
HOVERGENQ9ULX9
HOGENOMQ9ULX9
Homologs : HomoloGeneMAFF
Homology/Alignments : Family Browser (UCSC)MAFF
Gene fusions - Rearrangements
Fusion : MitelmanCELSR1/MAFF [22q13.31/22q13.1]  [t(22;22)(q13;q13)]  
Fusion: TCGACELSR1 22q13.31 MAFF 22q13.1 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAFF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAFF
dbVarMAFF
ClinVarMAFF
1000_GenomesMAFF 
Exome Variant ServerMAFF
ExAC (Exome Aggregation Consortium)MAFF (select the gene name)
Genetic variants : HAPMAP23764
Genomic Variants (DGV)MAFF [DGVbeta]
DECIPHERMAFF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAFF 
Mutations
ICGC Data PortalMAFF 
TCGA Data PortalMAFF 
Broad Tumor PortalMAFF
OASIS PortalMAFF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAFF  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAFF
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAFF
DgiDB (Drug Gene Interaction Database)MAFF
DoCM (Curated mutations)MAFF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAFF (select a term)
intoGenMAFF
Cancer3DMAFF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604877   
Orphanet
MedgenMAFF
Genetic Testing Registry MAFF
NextProtQ9ULX9 [Medical]
TSGene23764
GENETestsMAFF
Target ValidationMAFF
Huge Navigator MAFF [HugePedia]
snp3D : Map Gene to Disease23764
BioCentury BCIQMAFF
ClinGenMAFF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23764
Chemical/Pharm GKB GenePA30538
Clinical trialMAFF
Miscellaneous
canSAR (ICR)MAFF (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAFF
EVEXMAFF
GoPubMedMAFF
iHOPMAFF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:58:29 CEST 2017

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