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MAFF (MAF bZIP transcription factor F)

Identity

Alias (NCBI)U-MAF
hMafF
HGNC (Hugo) MAFF
HGNC Alias symbhMafF
HGNC Previous namev-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
LocusID (NCBI) 23764
Atlas_Id 41237
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38201994 and ends at 38216507 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CELSR1 (22q13.31) / MAFF (22q13.1)IFI6 (1p36.11) / MAFF (22q13.1)VILL (3p22.2) / MAFF (22q13.1)
CELSR1 22q13.31 / MAFF 22q13.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MAFF   6780
Cards
Entrez_Gene (NCBI)MAFF    MAF bZIP transcription factor F
AliasesU-MAF; hMafF
GeneCards (Weizmann)MAFF
Ensembl hg19 (Hinxton)ENSG00000185022 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185022 [Gene_View]  ENSG00000185022 [Sequence]  chr22:38201994-38216507 [Contig_View]  MAFF [Vega]
ICGC DataPortalENSG00000185022
TCGA cBioPortalMAFF
AceView (NCBI)MAFF
Genatlas (Paris)MAFF
SOURCE (Princeton)MAFF
Genetics Home Reference (NIH)MAFF
Genomic and cartography
GoldenPath hg38 (UCSC)MAFF  -     chr22:38201994-38216507 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAFF  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathMAFF - 22q13.1 [CytoView hg19]  MAFF - 22q13.1 [CytoView hg38]
ImmunoBaseENSG00000185022
Genome Data Viewer NCBIMAFF [Mapview hg19]  
OMIM604877   
Gene and transcription
Genbank (Entrez)AB025247 AI610651 AJ010857 AK002001 AK097953
RefSeq transcript (Entrez)NM_001161572 NM_001161573 NM_001161574 NM_012323 NM_152878
Consensus coding sequences : CCDS (NCBI)MAFF
Gene ExpressionMAFF [ NCBI-GEO ]   MAFF [ EBI - ARRAY_EXPRESS ]   MAFF [ SEEK ]   MAFF [ MEM ]
Gene Expression Viewer (FireBrowse)MAFF [ Firebrowse - Broad ]
GenevisibleExpression of MAFF in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23764
GTEX Portal (Tissue expression)MAFF
Human Protein AtlasENSG00000185022-MAFF [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULX9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULX9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULX9
PhosPhoSitePlusQ9ULX9
Domaine pattern : Prosite (Expaxy)BZIP (PS50217)   
Domains : Interpro (EBI)bZIP    bZIP_Maf    MafF    TF_DNA-bd_sf    Transcription_factor_Maf_fam   
Domain families : Pfam (Sanger)bZIP_Maf (PF03131)   
Domain families : Pfam (NCBI)pfam03131   
Domain families : Smart (EMBL)BRLZ (SM00338)  
Conserved Domain (NCBI)MAFF
SuperfamilyQ9ULX9
AlphaFold pdb e-kbQ9ULX9   
Human Protein Atlas [tissue]ENSG00000185022-MAFF [tissue]
HPRD05343
Protein Interaction databases
DIP (DOE-UCLA)Q9ULX9
IntAct (EBI)Q9ULX9
BioGRIDMAFF
STRING (EMBL)MAFF
ZODIACMAFF
Ontologies - Pathways
QuickGOQ9ULX9
Ontology : AmiGOchromatin  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription activator activity, RNA polymerase II-specific  in utero embryonic development  protein binding  nucleus  nucleoplasm  nucleoplasm  mitochondrion  regulation of transcription by RNA polymerase II  parturition  blood coagulation  skeletal muscle cell differentiation  sequence-specific DNA binding  regulation of epidermal cell differentiation  positive regulation of transcription by RNA polymerase II  sequence-specific double-stranded DNA binding  
Ontology : EGO-EBIchromatin  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription activator activity, RNA polymerase II-specific  in utero embryonic development  protein binding  nucleus  nucleoplasm  nucleoplasm  mitochondrion  regulation of transcription by RNA polymerase II  parturition  blood coagulation  skeletal muscle cell differentiation  sequence-specific DNA binding  regulation of epidermal cell differentiation  positive regulation of transcription by RNA polymerase II  sequence-specific double-stranded DNA binding  
Pathways : BIOCARTAOxidative Stress Induced Gene Expression Via Nrf2 [Genes]   
NDEx NetworkMAFF
Atlas of Cancer Signalling NetworkMAFF
Wikipedia pathwaysMAFF
Orthology - Evolution
OrthoDB23764
GeneTree (enSembl)ENSG00000185022
Phylogenetic Trees/Animal Genes : TreeFamMAFF
Homologs : HomoloGeneMAFF
Homology/Alignments : Family Browser (UCSC)MAFF
Gene fusions - Rearrangements
Fusion : MitelmanCELSR1/MAFF [22q13.31/22q13.1]  
Fusion : QuiverMAFF
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAFF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAFF
dbVarMAFF
ClinVarMAFF
MonarchMAFF
1000_GenomesMAFF 
Exome Variant ServerMAFF
GNOMAD BrowserENSG00000185022
Varsome BrowserMAFF
ACMGMAFF variants
VarityQ9ULX9
Genomic Variants (DGV)MAFF [DGVbeta]
DECIPHERMAFF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAFF 
Mutations
ICGC Data PortalMAFF 
TCGA Data PortalMAFF 
Broad Tumor PortalMAFF
OASIS PortalMAFF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAFF  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMAFF
Mutations and Diseases : HGMDMAFF
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMAFF
DgiDB (Drug Gene Interaction Database)MAFF
DoCM (Curated mutations)MAFF
CIViC (Clinical Interpretations of Variants in Cancer)MAFF
Cancer3DMAFF
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604877   
Orphanet
DisGeNETMAFF
MedgenMAFF
Genetic Testing Registry MAFF
NextProtQ9ULX9 [Medical]
GENETestsMAFF
Target ValidationMAFF
Huge Navigator MAFF [HugePedia]
ClinGenMAFF
Clinical trials, drugs, therapy
MyCancerGenomeMAFF
Protein Interactions : CTDMAFF
Pharm GKB GenePA30538
Pharm GKB PathwaysPA165985892   
PharosQ9ULX9
Clinical trialMAFF
Miscellaneous
canSAR (ICR)MAFF
HarmonizomeMAFF
DataMed IndexMAFF
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMAFF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:17:25 CEST 2021

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