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MAGEA2 (MAGE family member A2)

Identity

Alias_namesmember 2
MAGE2
Alias_symbol (synonym)MAGEA2A
CT1.2
Other alias
HGNC (Hugo) MAGEA2
LocusID (NCBI) 4101
Atlas_Id 41245
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 151883075 and ends at 151887096 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAGEA2   6800
Cards
Entrez_Gene (NCBI)MAGEA2  4101  MAGE family member A2
AliasesCT1.2; MAGE2; MAGEA2A
GeneCards (Weizmann)MAGEA2
Ensembl hg19 (Hinxton)ENSG00000268606 [Gene_View]  chrX:151883075-151887096 [Contig_View]  MAGEA2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000268606 [Gene_View]  chrX:151883075-151887096 [Contig_View]  MAGEA2 [Vega]
ICGC DataPortalENSG00000268606
TCGA cBioPortalMAGEA2
AceView (NCBI)MAGEA2
Genatlas (Paris)MAGEA2
WikiGenes4101
SOURCE (Princeton)MAGEA2
Genetics Home Reference (NIH)MAGEA2
Genomic and cartography
GoldenPath hg19 (UCSC)MAGEA2  -     chrX:151883075-151887096 +  Xq28   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAGEA2  -     Xq28   [Description]    (hg38-Dec_2013)
EnsemblMAGEA2 - Xq28 [CytoView hg19]  MAGEA2 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIMAGEA2 [Mapview hg19]  MAGEA2 [Mapview hg38]
OMIM300173   
Gene and transcription
Genbank (Entrez)AK290443 AU100045 BC013098 BC063681 BC108720
RefSeq transcript (Entrez)NM_001282501 NM_001282502 NM_001282504 NM_001282505 NM_005361 NM_175742 NM_175743
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011681 NW_004929448
Consensus coding sequences : CCDS (NCBI)MAGEA2
Cluster EST : UnigeneHs.736992 [ NCBI ]
CGAP (NCI)Hs.736992
Alternative Splicing GalleryENSG00000268606
Gene ExpressionMAGEA2 [ NCBI-GEO ]   MAGEA2 [ EBI - ARRAY_EXPRESS ]   MAGEA2 [ SEEK ]   MAGEA2 [ MEM ]
Gene Expression Viewer (FireBrowse)MAGEA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4101
GTEX Portal (Tissue expression)MAGEA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP43356   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP43356  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP43356
Splice isoforms : SwissVarP43356
PhosPhoSitePlusP43356
Domaine pattern : Prosite (Expaxy)MAGE (PS50838)   
Domains : Interpro (EBI)MAGE_N    MAGEA2    MHD_dom   
Domain families : Pfam (Sanger)MAGE (PF01454)    MAGE_N (PF12440)   
Domain families : Pfam (NCBI)pfam01454    pfam12440   
Conserved Domain (NCBI)MAGEA2
DMDM Disease mutations4101
Blocks (Seattle)MAGEA2
SuperfamilyP43356
Human Protein AtlasENSG00000268606
Peptide AtlasP43356
HPRD02165
Protein Interaction databases
DIP (DOE-UCLA)P43356
IntAct (EBI)P43356
FunCoupENSG00000268606
BioGRIDMAGEA2
STRING (EMBL)MAGEA2
ZODIACMAGEA2
Ontologies - Pathways
QuickGOP43356
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  protein binding  nucleus  transcription, DNA-templated  PML body  ubiquitin protein ligase binding  negative regulation of protein sumoylation  histone deacetylase binding  cellular protein catabolic process  positive regulation of ubiquitin-protein transferase activity  repressing transcription factor binding  signal transduction by p53 class mediator  cellular senescence  negative regulation of protein acetylation  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  protein binding  nucleus  transcription, DNA-templated  PML body  ubiquitin protein ligase binding  negative regulation of protein sumoylation  histone deacetylase binding  cellular protein catabolic process  positive regulation of ubiquitin-protein transferase activity  repressing transcription factor binding  signal transduction by p53 class mediator  cellular senescence  negative regulation of protein acetylation  
NDEx NetworkMAGEA2
Atlas of Cancer Signalling NetworkMAGEA2
Wikipedia pathwaysMAGEA2
Orthology - Evolution
OrthoDB4101
GeneTree (enSembl)ENSG00000268606
Phylogenetic Trees/Animal Genes : TreeFamMAGEA2
HOVERGENP43356
HOGENOMP43356
Homologs : HomoloGeneMAGEA2
Homology/Alignments : Family Browser (UCSC)MAGEA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAGEA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAGEA2
dbVarMAGEA2
ClinVarMAGEA2
1000_GenomesMAGEA2 
Exome Variant ServerMAGEA2
ExAC (Exome Aggregation Consortium)MAGEA2 (select the gene name)
Genetic variants : HAPMAP4101
Genomic Variants (DGV)MAGEA2 [DGVbeta]
DECIPHER (Syndromes)X:151883075-151887096  ENSG00000268606
CONAN: Copy Number AnalysisMAGEA2 
Mutations
ICGC Data PortalMAGEA2 
TCGA Data PortalMAGEA2 
Broad Tumor PortalMAGEA2
OASIS PortalMAGEA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAGEA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAGEA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAGEA2
DgiDB (Drug Gene Interaction Database)MAGEA2
DoCM (Curated mutations)MAGEA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAGEA2 (select a term)
intoGenMAGEA2
Cancer3DMAGEA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300173   
Orphanet
MedgenMAGEA2
Genetic Testing Registry MAGEA2
NextProtP43356 [Medical]
TSGene4101
GENETestsMAGEA2
Huge Navigator MAGEA2 [HugePedia]
snp3D : Map Gene to Disease4101
BioCentury BCIQMAGEA2
ClinGenMAGEA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4101
Chemical/Pharm GKB GenePA30546
Clinical trialMAGEA2
Miscellaneous
canSAR (ICR)MAGEA2 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAGEA2
EVEXMAGEA2
GoPubMedMAGEA2
iHOPMAGEA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:08:14 CEST 2017

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